RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 ZNF525Q8N782 197 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 STPG4Q8N801 248 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 OR52L2PQ8NGH6 319 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 PROCRQ9UNN8 238 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A10PA6NDY2 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A18PA6NE21 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A16PA6NEW6 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A20PA6NIJ5 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A8PA6NJQ4 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A7PA6NKC0 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A22PA8MWA6 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A12PA8MX19 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A5PA8MXJ8 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A23PA8MXZ1 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 CCL25O15444 150 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 HRASP01112 189 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A15PP0C7V4 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A13PP0C7W8 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A14PP0C7W9 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 FAM90A24PP0C7X0 464 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 COTL1Q14019 142 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 VHLLQ6RSH7 139 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 HAPLN4Q86UW8 402 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 SCCPDHQ8NBX0 429 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 SAMD10Q9BYL1 202 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 RNF114Q9Y508 228 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 CCDC168Q8NDH2 2452 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 CCKARP32238 428 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 SLC35B1P78383 322 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 CMTM2Q8TAZ6 248 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 MRGPRDQ8TDS7 321 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 ZDHHC16Q969W1 377 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 VAMP8Q9BV40 100 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 TMEM242Q9NWH2 141 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 ZNF835Q9Y2P0 537 aa11.93□□□□□ -0.5
SFSWAP-210ENST00000541286 ADMP35318 185 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 EDDM3AQ14507 147 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 ACTL10Q5JWF8 245 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 WNT10AQ9GZT5 417 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 C20orf202A1L168 122 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 SH2D1BO14796 132 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 HINT1P49773 126 aaPredicted RBP11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 UBE2NP61088 152 aaKnown RBP11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 KIAA1644Q3SXP7 199 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 ZNF585BQ52M93 769 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 LINC01560Q8TB33 94 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 ACY3Q96HD9 319 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 ITPR2Q14571 2701 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 ZNF83P51522 516 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 ZNF114Q8NC26 417 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 NINJ1Q92982 152 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 TMEM45BQ96B21 275 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 RTL8AQ9BWD3 113 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 LIN7CQ9NUP9 197 aaKnown RBP11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 KCNIP1Q9NZI2 227 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 TP73-AS1Q9UF72 201 aa11.92□□□□□ -0.5
SFSWAP-210ENST00000541286 OR5B21A6NL26 309 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 M0QZ24 198 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 RAC2P15153 192 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 MAJINQ3KP22 176 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 ASPHD1Q5U4P2 390 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 UNQ5815/PRO19632Q6UWF5 114 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 MRGPRGQ86SM5 289 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 SAXO1Q8IYX7 474 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 SGMS2Q8NHU3 365 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 ABHD14BQ96IU4 210 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 CTDSP1Q9GZU7 261 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 MPC1Q9Y5U8 109 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 DUXBA0A1W2PPF3 345 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 J3QT63 122 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 FABP6P51161 128 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 FFAR4Q5NUL3 377 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 SP5Q6BEB4 398 aaPredicted RBP11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 WDR86Q86TI4 376 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 BAGE3Q86Y29 109 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 BAGE2Q86Y30 109 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 MIEN1Q9BRT3 115 aa11.91□□□□□ -0.5
SFSWAP-210ENST00000541286 KIR2DL5BA0A0G2JN68 375 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 KIR2DL5BA0A0G2JPC4 375 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 SERF1AO75920 110 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 KBTBD11O94819 623 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 KIR2DL5AQ8N109 375 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 SLC25A40Q8TBP6 338 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 TAF15Q92804 592 aaKnown RBP eCLIP11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 PSPNO60542 156 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 IFNA1P01562 189 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 CA7P43166 264 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 PSMB3P49720 205 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 PPP1CBP62140 327 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 TBC1D28Q2M2D7 210 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 GCSAMLQ5JQS6 135 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 Q6ZT83 130 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 RND1Q92730 232 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 TXN2Q99757 166 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 DCTN5Q9BTE1 182 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 WDR61Q9GZS3 305 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 RYDENQ9NUL5 291 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 TMEM106BQ9NUM4 274 aa11.9□□□□□ -0.5
SFSWAP-210ENST00000541286 LRP5LA4QPB2 252 aa11.9□□□□□ -0.51
SFSWAP-210ENST00000541286 IGLV2-14P01704 120 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms