RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 C4BPBP20851 252 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 FAUP35544 74 aaKnown RBP5.48□□□□□ -1.53
YBX3-209ENST00000540747 CCR6P51684 374 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 SCAND1P57086 179 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 GNG2P59768 71 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 HLA-DRB3P79483 266 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 EWSR1Q01844 656 aaKnown RBP eCLIP5.48□□□□□ -1.53
YBX3-209ENST00000540747 KLF9Q13886 244 aaPredicted RBP5.48□□□□□ -1.53
YBX3-209ENST00000540747 RPEL1Q2QD12 228 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 DEFB114Q30KQ6 69 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 TMEM69Q5SWH9 247 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 OR10K2Q6IF99 312 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 LRRTM1Q86UE6 522 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.48□□□□□ -1.53
YBX3-209ENST00000540747 OR52I2Q8NH67 350 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 EDARADDQ8WWZ3 215 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 OVOL2Q9BRP0 275 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 NICN1Q9BSH3 213 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 HDHD3Q9BSH5 251 aaPredicted RBP5.48□□□□□ -1.53
YBX3-209ENST00000540747 SRD5A3Q9H8P0 318 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 HRASLSQ9HDD0 168 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 ZNF355PQ9NSJ1 428 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 ZNF230Q9UIE0 474 aaPredicted RBP5.48□□□□□ -1.53
YBX3-209ENST00000540747 MGAT4AQ9UM21 535 aa5.48□□□□□ -1.53
YBX3-209ENST00000540747 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.47□□□□□ -1.53
YBX3-209ENST00000540747 SRRM4A7MD48 611 aaKnown RBP5.47□□□□□ -1.53
YBX3-209ENST00000540747 OR11H12B2RN74 326 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 SMLR1H3BR10 107 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 TSC22D2O75157 780 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 BTCP35070 178 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 CEACAM6P40199 344 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 HTR2BP41595 481 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 KIR2DS2P43631 304 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 LGALS7P47929 136 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 CLDN12P56749 244 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 TAS2R20P59543 309 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 RPS16P62249 146 aaKnown RBP5.47□□□□□ -1.53
YBX3-209ENST00000540747 RAB11BQ15907 218 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 TMEM177Q53S58 311 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 Q5BKY6 102 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 GLT8D1Q68CQ7 371 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 WFDC3Q8IUB2 231 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 FAM89BQ8N5H3 189 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 SNAPC3Q92966 411 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 GFI1Q99684 422 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 TMEM59Q9BXS4 323 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 RIMS4Q9H426 269 aaPredicted RBP5.47□□□□□ -1.53
YBX3-209ENST00000540747 KCNK15Q9H427 330 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 Q9N2K0 584 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 SLC35D1Q9NTN3 355 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 SLC2A8Q9NY64 477 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 TAS2R8Q9NYW2 309 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 PEMTQ9UBM1 199 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 SCP2D1Q9UJQ7 156 aa5.47□□□□□ -1.53
YBX3-209ENST00000540747 TRAV18A0A075B6X5 111 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 ANKRD20A5PA0PJZ0 165 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 MSGN1A6NI15 193 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 C2orf70A6NJV1 201 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 FAM223BA6NKX1 122 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 M0R1X1 148 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 LGALS9O00182 355 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 XRCC3O43542 346 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 CNIH1O95406 144 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 LY6G6CO95867 125 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 APOA2P02652 100 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 IL5P05113 134 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 SCTP09683 121 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 OR9G9P0C7N8 305 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 SULT1A3P0DMM9 295 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 SULT1A4P0DMN0 295 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 FOLR2P14207 255 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 ATF4P18848 351 aaPredicted RBP5.46□□□□□ -1.54
YBX3-209ENST00000540747 ZBTB25P24278 435 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 PRSS3P35030 304 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 TMEM50BP56557 158 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 RHOGP84095 191 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 TNFRSF9Q07011 255 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 EXOSC2Q13868 293 aaKnown RBP5.46□□□□□ -1.54
YBX3-209ENST00000540747 PRSS8Q16651 343 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 KLK9Q2XQG4 91 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 THOC7Q6I9Y2 204 aaKnown RBP5.46□□□□□ -1.54
YBX3-209ENST00000540747 FAM223AQ8IWN6 122 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 C9orf62Q8N4C0 152 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 RPP25LQ8N5L8 163 aaKnown RBP5.46□□□□□ -1.54
YBX3-209ENST00000540747 BEST4Q8NFU0 473 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 KCNG3Q8TAE7 436 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 GIMAP1Q8WWP7 306 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 DDB2Q92466 427 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 SLC25A38Q96DW6 304 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 WDR89Q96FK6 387 aaPredicted RBP5.46□□□□□ -1.54
YBX3-209ENST00000540747 ST6GALNAC5Q9BVH7 336 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 LPAR5Q9H1C0 372 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 C20orf85Q9H1P6 137 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 AUNIPQ9H7T9 357 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 COA4Q9NYJ1 87 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 RDH8Q9NYR8 311 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 TECRQ9NZ01 308 aaKnown RBP5.46□□□□□ -1.54
YBX3-209ENST00000540747 AK3Q9UIJ7 227 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 KLK9Q9UKQ9 250 aa5.46□□□□□ -1.54
YBX3-209ENST00000540747 HSF4Q9ULV5 492 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms