RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 ARSJQ5FYB0 599 aaPredicted RBP17.13■□□□□ 0.33
LSM14A-202ENST00000540746 RELNP78509 3460 aa17.12■□□□□ 0.33
LSM14A-202ENST00000540746 IL6RP08887 468 aaPredicted RBP17.12■□□□□ 0.33
LSM14A-202ENST00000540746 OPRK1P41145 380 aa17.12■□□□□ 0.33
LSM14A-202ENST00000540746 KIAA0141Q14154 515 aaPredicted RBP17.12■□□□□ 0.33
LSM14A-202ENST00000540746 ADIRFQ15847 76 aa17.12■□□□□ 0.33
LSM14A-202ENST00000540746 MIC13Q5XKP0 118 aa17.12■□□□□ 0.33
LSM14A-202ENST00000540746 WFIKKN1Q96NZ8 548 aa17.12■□□□□ 0.33
LSM14A-202ENST00000540746 SAP30LQ9HAJ7 183 aa17.12■□□□□ 0.33
LSM14A-202ENST00000540746 LSM4Q9Y4Z0 139 aaKnown RBP17.12■□□□□ 0.33
LSM14A-202ENST00000540746 CCL3L1P16619 93 aa17.12■□□□□ 0.33
LSM14A-202ENST00000540746 NPPCP23582 126 aa17.12■□□□□ 0.33
LSM14A-202ENST00000540746 ARFGEF3Q5TH69 2177 aa17.12■□□□□ 0.33
LSM14A-202ENST00000540746 NKX6-3A6NJ46 265 aa17.11■□□□□ 0.33
LSM14A-202ENST00000540746 RPL23P62829 140 aaKnown RBP17.11■□□□□ 0.33
LSM14A-202ENST00000540746 RPL31P62899 125 aaKnown RBP17.11■□□□□ 0.33
LSM14A-202ENST00000540746 SLC24A4Q8NFF2 622 aa17.11■□□□□ 0.33
LSM14A-202ENST00000540746 OR13D1Q8NGV5 346 aa17.11■□□□□ 0.33
LSM14A-202ENST00000540746 RAB1CQ92928 201 aa17.11■□□□□ 0.33
LSM14A-202ENST00000540746 SCNM1Q9BWG6 230 aa17.11■□□□□ 0.33
LSM14A-202ENST00000540746 PXMP4Q9Y6I8 212 aa17.11■□□□□ 0.33
LSM14A-202ENST00000540746 TMEM178BH3BS89 294 aa17.11■□□□□ 0.33
LSM14A-202ENST00000540746 CA2P00918 260 aa17.11■□□□□ 0.33
LSM14A-202ENST00000540746 HRASP01112 189 aa17.11■□□□□ 0.33
LSM14A-202ENST00000540746 COL8A2P25067 703 aa17.11■□□□□ 0.33
LSM14A-202ENST00000540746 NPY1RP25929 384 aa17.11■□□□□ 0.33
LSM14A-202ENST00000540746 NCMAPQ5T1S8 102 aa17.11■□□□□ 0.33
LSM14A-202ENST00000540746 RND1Q92730 232 aa17.11■□□□□ 0.33
LSM14A-202ENST00000540746 TRGC2P03986 189 aa17.1■□□□□ 0.33
LSM14A-202ENST00000540746 TMEM30BQ3MIR4 351 aa17.1■□□□□ 0.33
LSM14A-202ENST00000540746 SSMEM1Q8WWF3 244 aa17.1■□□□□ 0.33
LSM14A-202ENST00000540746 CCL17Q92583 94 aa17.1■□□□□ 0.33
LSM14A-202ENST00000540746 FAM210BQ96KR6 192 aa17.1■□□□□ 0.33
LSM14A-202ENST00000540746 OR51B2Q9Y5P1 312 aa17.1■□□□□ 0.33
LSM14A-202ENST00000540746 C11orf94C9JXX5 98 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 TMEM249Q2WGJ8 235 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 TMEM200BQ69YZ2 307 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 LYPD2Q6UXB3 125 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 OR51G1Q8NGK1 321 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 NEUROG1Q92886 237 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 HINT2Q9BX68 163 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 SLC35D1Q9NTN3 355 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 SPTA1P02549 2419 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 PPIAL4EA0A075B759 164 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 PPIAL4DF5H284 164 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 K7ENP7 123 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 OPN1MWP04001 364 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 S100A8P05109 93 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 PPIAL4FP0DN26 164 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 OPN1MW2P0DN77 364 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 OPN1MW3P0DN78 364 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 MEF2CQ06413 473 aaPredicted RBP17.09■□□□□ 0.33
LSM14A-202ENST00000540746 BSXQ3C1V8 233 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 SLC16A13Q7RTY0 426 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 C1orf87Q8N0U7 546 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 NEIL1Q96FI4 390 aaPredicted RBP17.09■□□□□ 0.33
LSM14A-202ENST00000540746 CTDSP1Q9GZU7 261 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 NPVFQ9HCQ7 196 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 PPIAL4AQ9Y536 164 aa17.09■□□□□ 0.33
LSM14A-202ENST00000540746 A0A1W2PPV4 95 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 UPK2O00526 184 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 TNFRSF13BO14836 293 aaPredicted RBP17.08■□□□□ 0.33
LSM14A-202ENST00000540746 HIST1H2BKO60814 126 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 HIST1H2BJP06899 126 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 HIST1H2BOP23527 126 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 HIST1H2BBP33778 126 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 HIST1H2BDP58876 126 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 UBE2G2P60604 165 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 HIST1H2BCP62807 126 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 HIST2H2BEQ16778 126 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.08■□□□□ 0.33
LSM14A-202ENST00000540746 ZNF833PQ6ZTB9 187 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 C16orf82Q7Z2V1 217 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 HIST1H2BHQ93079 126 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 HIST1H2BNQ99877 126 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 HIST1H2BMQ99879 126 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 GAL3ST2Q9H3Q3 398 aa17.08■□□□□ 0.33
LSM14A-202ENST00000540746 SHISA9B4DS77 424 aa17.08■□□□□ 0.32
LSM14A-202ENST00000540746 NDUFS6O75380 124 aaKnown RBP17.08■□□□□ 0.32
LSM14A-202ENST00000540746 CLN5O75503 358 aa17.08■□□□□ 0.32
LSM14A-202ENST00000540746 ATP5G3P48201 142 aa17.08■□□□□ 0.32
LSM14A-202ENST00000540746 DMRTC2Q8IXT2 367 aaPredicted RBP17.08■□□□□ 0.32
LSM14A-202ENST00000540746 RNASE6Q93091 150 aaKnown RBP17.08■□□□□ 0.32
LSM14A-202ENST00000540746 MRPL20Q9BYC9 149 aaKnown RBP17.08■□□□□ 0.32
LSM14A-202ENST00000540746 DOK5Q9P104 306 aa17.08■□□□□ 0.32
LSM14A-202ENST00000540746 IGF2RP11717 2491 aa17.07■□□□□ 0.32
LSM14A-202ENST00000540746 J3QR06 171 aa17.07■□□□□ 0.32
LSM14A-202ENST00000540746 SOX15O60248 233 aa17.07■□□□□ 0.32
LSM14A-202ENST00000540746 FAM87AP0C7U9 286 aa17.07■□□□□ 0.32
LSM14A-202ENST00000540746 ARL14EPLP0DKL9 152 aa17.07■□□□□ 0.32
LSM14A-202ENST00000540746 RTL8BQ17RB0 113 aa17.07■□□□□ 0.32
LSM14A-202ENST00000540746 ABHD5Q8WTS1 349 aa17.07■□□□□ 0.32
LSM14A-202ENST00000540746 ZNF714Q96N38 554 aa17.07■□□□□ 0.32
LSM14A-202ENST00000540746 ENY2Q9NPA8 101 aa17.07■□□□□ 0.32
LSM14A-202ENST00000540746 TMEM106BQ9NUM4 274 aa17.07■□□□□ 0.32
LSM14A-202ENST00000540746 PRNDQ9UKY0 176 aa17.07■□□□□ 0.32
LSM14A-202ENST00000540746 TRBV24-1A0A075B6N3 115 aa17.06■□□□□ 0.32
LSM14A-202ENST00000540746 E7EQL1 145 aa17.06■□□□□ 0.32
LSM14A-202ENST00000540746 OR10A7Q8NGE5 316 aa17.06■□□□□ 0.32
LSM14A-202ENST00000540746 ZNF257Q9Y2Q1 563 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms