RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 TMEM218A2RU14 115 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 PRSS46E5RG02 174 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 BUB1B-PAK6H3BSN5 160 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 PRH1P02810 166 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 CD5P06127 495 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 PAX1P15863 534 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 PAX2Q02962 417 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 TMEM267Q0VDI3 215 aaPredicted RBP6.75□□□□□ -1.33
C2CD3-215ENST00000540452 PEA15Q15121 130 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 VMA21Q3ZAQ7 101 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 C2orf83Q53S99 150 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 MINOS1Q5TGZ0 78 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 SP5Q6BEB4 398 aaPredicted RBP6.75□□□□□ -1.33
C2CD3-215ENST00000540452 CCDC144NLQ6NUI1 221 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 C1orf229Q6ZS94 237 aaPredicted RBP6.75□□□□□ -1.33
C2CD3-215ENST00000540452 HAPLN4Q86UW8 402 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 SVBPQ8N300 66 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 TMEM217Q8N7C4 229 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 MBD3L1Q8WWY6 194 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 CACNG8Q8WXS5 425 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 LEAP2Q969E1 77 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 BSCL2Q96G97 398 aaPredicted RBP6.75□□□□□ -1.33
C2CD3-215ENST00000540452 OR4C12Q96R67 309 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 QTRT1Q9BXR0 403 aaKnown RBP6.75□□□□□ -1.33
C2CD3-215ENST00000540452 MRPL20Q9BYC9 149 aaKnown RBP6.75□□□□□ -1.33
C2CD3-215ENST00000540452 MS4A7Q9GZW8 240 aaPredicted RBP6.75□□□□□ -1.33
C2CD3-215ENST00000540452 HEYLQ9NQ87 328 aaPredicted RBP6.75□□□□□ -1.33
C2CD3-215ENST00000540452 WDR83OSQ9Y284 106 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 MINOS1-NBL1R4GNA1 71 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 DOPEY2Q9Y3R5 2298 aa6.75□□□□□ -1.33
C2CD3-215ENST00000540452 MALRD1Q5VYJ5 2156 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 ODF3BA8MYP8 253 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 H3BP45 60 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 LY6LH3BQJ8 138 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 IFNA10P01566 189 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 IGHV2-5P01817 119 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 IGKV1-16P04430 117 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 H2AFB1P0C5Y9 115 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 SAA1P0DJI8 122 aaPredicted RBP6.74□□□□□ -1.33
C2CD3-215ENST00000540452 NPY1RP25929 384 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 CD1BP29016 333 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 HOXA1P49639 335 aaPredicted RBP6.74□□□□□ -1.33
C2CD3-215ENST00000540452 PDLIM4P50479 330 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 DSCR9P59020 149 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 RPL8P62917 257 aaKnown RBP6.74□□□□□ -1.33
C2CD3-215ENST00000540452 RAB31Q13636 194 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 TMEM41BQ5BJD5 291 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 TMEM182Q6ZP80 229 aaPredicted RBP6.74□□□□□ -1.33
C2CD3-215ENST00000540452 MMD2Q8IY49 270 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 ZNF709Q8N972 641 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 ZNF114Q8NC26 417 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 SLC24A4Q8NFF2 622 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 OR4P4Q8NGL7 312 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 OR10G4Q8NGN3 311 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 PCNPQ8WW12 178 aaKnown RBP6.74□□□□□ -1.33
C2CD3-215ENST00000540452 UBTD1Q9HAC8 227 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 PLEKHA3Q9HB20 300 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 NPVFQ9HCQ7 196 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 NDUFA4L2Q9NRX3 87 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 TBL2Q9Y4P3 447 aaKnown RBP6.74□□□□□ -1.33
C2CD3-215ENST00000540452 OR51B2Q9Y5P1 312 aa6.74□□□□□ -1.33
C2CD3-215ENST00000540452 TET2Q6N021 2002 aaPredicted RBP6.74□□□□□ -1.33
C2CD3-215ENST00000540452 SPTBN1Q01082 2364 aaKnown RBP6.73□□□□□ -1.33
C2CD3-215ENST00000540452 A0A1W2PPE3 182 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 A0A1W2PPR1 153 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 MEX3AA1L020 520 aaKnown RBP6.73□□□□□ -1.33
C2CD3-215ENST00000540452 FOXH1O75593 365 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 NXPH3O95157 252 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 HTR1DP28221 377 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 GPX4P36969 197 aaPredicted RBP6.73□□□□□ -1.33
C2CD3-215ENST00000540452 PPT1P50897 306 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 SUB1P53999 127 aaKnown RBP eCLIP6.73□□□□□ -1.33
C2CD3-215ENST00000540452 ERHP84090 104 aaKnown RBP6.73□□□□□ -1.33
C2CD3-215ENST00000540452 ZNF616Q08AN1 781 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 ARL16Q0P5N6 197 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 CLEC9AQ6UXN8 241 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 ETV3LQ6ZN32 361 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 THNSL2Q86YJ6 484 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 FAM213BQ8TBF2 198 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 SUN5Q8TC36 379 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 RNASEH2CQ8TDP1 164 aaKnown RBP6.73□□□□□ -1.33
C2CD3-215ENST00000540452 RPEQ96AT9 228 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 TXNDC17Q9BRA2 123 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 C19orf24Q9BVV8 132 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 COMMD5Q9GZQ3 224 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 SH3BGRL3Q9H299 93 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 HRH4Q9H3N8 390 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 PLA2G2EQ9NZK7 142 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 DPM3Q9P2X0 92 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 ITPR3Q14573 2671 aa6.73□□□□□ -1.33
C2CD3-215ENST00000540452 NBASA2RRP1 2371 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 LRRK2Q5S007 2527 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 IGHV1-3A0A0C4DH29 117 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 CTXND1A0A1B0GTU2 59 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 C22orf46C9J442 243 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 LYNX1G3V0Z9 82 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 RNASEK-C17orf49H0YIS7 233 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 CORTO00230 105 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 SNAPINO95295 136 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 IFNA1P01562 189 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms