RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 AGMATQ9BSE5 352 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 ARV1Q9H2C2 271 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 WFDC1Q9HC57 220 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 CALYQ9NYX4 217 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 CACNG5Q9UF02 275 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 RNF115Q9Y4L5 304 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 PPIAL4AQ9Y536 164 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 DSCAML1Q8TD84 2053 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 DOCK11Q5JSL3 2073 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 COL12A1Q99715 3063 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-212ENST00000540304 IGSF23A1L1A6 192 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 FAM24AA6NFZ4 105 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 CLDN1O95832 211 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 CGB3P0DN86 165 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 CGB7P0DN87 165 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 ID4P47928 161 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 LOXL3P58215 753 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 COL5A1-AS1Q5SY13 56 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 DUX4L9Q6RFH8 374 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-212ENST00000540304 Q6ZRM9 215 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 C1orf87Q8N0U7 546 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 TMEM252Q8N6L7 170 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 OR10W1Q8NGF6 305 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 CCL13Q99616 98 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 CITED1Q99966 193 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 PRORYQ9H606 182 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 DYNLRB1Q9NP97 96 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 PGPEP1Q9NXJ5 209 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 LPAR3Q9UBY5 353 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 MMP24Q9Y5R2 645 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 ABCA4P78363 2273 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 TRGV10A0A0A0MS01 117 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 TRAV38-1A0A0B4J264 116 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 KIAA1324LA8MWY0 1029 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-212ENST00000540304 C9JQL5 133 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 CHST1O43916 411 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 RAMP3O60896 148 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 ADORA2A-AS1P86434 159 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 EFNB3Q15768 340 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 MRPL52Q86TS9 123 aaKnown RBP7.98□□□□□ -1.13
CLIP1-212ENST00000540304 FGFRL1Q8N441 504 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 FAM216BQ8N7L0 139 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 OR4C5Q8NGB2 326 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 NEUROG1Q92886 237 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 RBMXL1Q96E39 390 aaKnown RBP7.98□□□□□ -1.13
CLIP1-212ENST00000540304 RAB40CQ96S21 281 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 CST9LQ9H4G1 147 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 TMEM140Q9NV12 185 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 RFNGQ9Y644 331 aa7.98□□□□□ -1.13
CLIP1-212ENST00000540304 KBTBD11-OT1A0A1B0GTJ5 212 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 A0A1B0GV72 72 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 TMEM50AO95807 157 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 IGHV3-7P01780 117 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 AMBPP02760 352 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 GPR12P47775 334 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 SULT1A1P50225 295 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 HERV-K104P63124 156 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 BAXQ07812 192 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 C17orf58Q2M2W7 97 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 LINC01560Q8TB33 94 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 RPUSD4Q96CM3 377 aaKnown RBP7.97□□□□□ -1.13
CLIP1-212ENST00000540304 MS4A5Q9H3V2 200 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 CLN8Q9UBY8 286 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 C17orf98A8MV24 154 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 FBXO24O75426 580 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 CD5P06127 495 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 OMGP23515 440 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 LGALS7P47929 136 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 SULT1A2P50226 295 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 PAX9P55771 341 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 LINC00205P59089 165 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 ZNF816Q0VGE8 651 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-212ENST00000540304 PJVKQ0ZLH3 352 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 Q6ZVH6 145 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 TMEM144Q7Z5S9 345 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 LINC01551Q86U37 167 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 GINS3Q9BRX5 216 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 MMP26Q9NRE1 261 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 LAMP3Q9UQV4 416 aa7.97□□□□□ -1.13
CLIP1-212ENST00000540304 SPTBN1Q01082 2364 aaKnown RBP7.96□□□□□ -1.13
CLIP1-212ENST00000540304 PPIAL4EA0A075B759 164 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 KIR2DL5BA0A0G2JN68 375 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 KIR2DL5BA0A0G2JPC4 375 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 A4D1N5 150 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 PPIAL4DF5H284 164 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 TMEM178BH3BS89 294 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 M0R036 132 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 TMPRSS2O15393 492 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 SYNGR2O43760 224 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 S1PR2O95136 353 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 CLDN14O95500 239 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 STAG3L2P0CL84 134 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 PPIAL4FP0DN26 164 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 GRNP28799 593 aaKnown RBP7.96□□□□□ -1.13
CLIP1-212ENST00000540304 BRWD1-AS2P59051 145 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 RPL23AP62750 156 aaKnown RBP7.96□□□□□ -1.13
CLIP1-212ENST00000540304 ZNF266Q14584 549 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 C5orf64Q2M2E5 130 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 TCF23Q7RTU1 214 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms