RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 C15orf61A6NNL5 157 aa15.01□□□□□ -0.01
TNFRSF1A-213ENST00000540022 RBMXL2O75526 392 aaKnown RBP15.01□□□□□ -0.01
TNFRSF1A-213ENST00000540022 HILS1P60008 231 aa15.01□□□□□ -0.01
TNFRSF1A-213ENST00000540022 SSBP2P81877 361 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF1A-213ENST00000540022 FOXRED2Q8IWF2 684 aa15.01□□□□□ -0.01
TNFRSF1A-213ENST00000540022 MMD2Q8IY49 270 aa15.01□□□□□ -0.01
TNFRSF1A-213ENST00000540022 QTRT1Q9BXR0 403 aaKnown RBP15.01□□□□□ -0.01
TNFRSF1A-213ENST00000540022 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF1A-213ENST00000540022 TMEM14BQ9NUH8 114 aa15.01□□□□□ -0.01
TNFRSF1A-213ENST00000540022 GSKIPQ9P0R6 139 aa15.01□□□□□ -0.01
TNFRSF1A-213ENST00000540022 CA2P00918 260 aa15□□□□□ -0.01
TNFRSF1A-213ENST00000540022 KRTAP24-1Q3LI83 254 aa15□□□□□ -0.01
TNFRSF1A-213ENST00000540022 C10orf55Q5SWW7 151 aa15□□□□□ -0.01
TNFRSF1A-213ENST00000540022 ZNF429Q86V71 674 aa15□□□□□ -0.01
TNFRSF1A-213ENST00000540022 OR4D5Q8NGN0 318 aa15□□□□□ -0.01
TNFRSF1A-213ENST00000540022 OR1S1Q8NH92 325 aa15□□□□□ -0.01
TNFRSF1A-213ENST00000540022 TMEM158Q8WZ71 300 aa15□□□□□ -0.01
TNFRSF1A-213ENST00000540022 PDCD10Q9BUL8 212 aa15□□□□□ -0.01
TNFRSF1A-213ENST00000540022 PRNDQ9UKY0 176 aa15□□□□□ -0.01
TNFRSF1A-213ENST00000540022 FOXA2Q9Y261 457 aaPredicted RBP15□□□□□ -0.01
TNFRSF1A-213ENST00000540022 CLDN34H7C241 214 aa14.99□□□□□ -0.01
TNFRSF1A-213ENST00000540022 M0QZK8 103 aa14.99□□□□□ -0.01
TNFRSF1A-213ENST00000540022 ST8SIA3O43173 380 aa14.99□□□□□ -0.01
TNFRSF1A-213ENST00000540022 GPR137BO60478 399 aa14.99□□□□□ -0.01
TNFRSF1A-213ENST00000540022 NXPH3O95157 252 aa14.99□□□□□ -0.01
TNFRSF1A-213ENST00000540022 HLA-DRB1P01911 266 aa14.99□□□□□ -0.01
TNFRSF1A-213ENST00000540022 BLCAPP62952 87 aa14.99□□□□□ -0.01
TNFRSF1A-213ENST00000540022 IL15RAQ13261 267 aa14.99□□□□□ -0.01
TNFRSF1A-213ENST00000540022 TNXAQ16473 311 aa14.99□□□□□ -0.01
TNFRSF1A-213ENST00000540022 AARDQ4LEZ3 155 aa14.99□□□□□ -0.01
TNFRSF1A-213ENST00000540022 CXorf66Q5JRM2 361 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF1A-213ENST00000540022 OPN1MWP04001 364 aa14.98□□□□□ -0.01
TNFRSF1A-213ENST00000540022 FGF2P09038 288 aa14.98□□□□□ -0.01
TNFRSF1A-213ENST00000540022 TRAPPC2P0DI81 140 aa14.98□□□□□ -0.01
TNFRSF1A-213ENST00000540022 TRAPPC2BP0DI82 140 aa14.98□□□□□ -0.01
TNFRSF1A-213ENST00000540022 OPN1MW2P0DN77 364 aa14.98□□□□□ -0.01
TNFRSF1A-213ENST00000540022 OPN1MW3P0DN78 364 aa14.98□□□□□ -0.01
TNFRSF1A-213ENST00000540022 GNB1P62873 340 aa14.98□□□□□ -0.01
TNFRSF1A-213ENST00000540022 CX3CL1P78423 397 aa14.98□□□□□ -0.01
TNFRSF1A-213ENST00000540022 SRSF4Q08170 494 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1A-213ENST00000540022 HSPB9Q9BQS6 159 aa14.98□□□□□ -0.01
TNFRSF1A-213ENST00000540022 ZNF436Q9C0F3 470 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1A-213ENST00000540022 OR51B2Q9Y5P1 312 aa14.98□□□□□ -0.01
TNFRSF1A-213ENST00000540022 IGHV7-81A0A0B4J1V7 117 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 TEX50A0A1B0GTY4 177 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 E7EUB6 86 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 ACTL6BO94805 426 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 MAS1LP35410 378 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 NDPQ00604 133 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 ZNF562Q6V9R5 426 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 Q6ZS46 218 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 COMMD5Q9GZQ3 224 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 A0A1B0GW64 132 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 CGB1A6NKQ9 187 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 COMPP49747 757 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 HSPE1P61604 102 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 UBA52P62987 128 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 CD83Q01151 205 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 ID3Q02535 119 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 NMES1Q9C002 83 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 FKBP11Q9NYL4 201 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 HSPB7Q9UBY9 170 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 ZNF257Q9Y2Q1 563 aa14.97□□□□□ -0.01
TNFRSF1A-213ENST00000540022 TCF21O43680 179 aa14.96□□□□□ -0.02
TNFRSF1A-213ENST00000540022 CNIH1O95406 144 aa14.96□□□□□ -0.02
TNFRSF1A-213ENST00000540022 SCGB1D2O95969 90 aa14.96□□□□□ -0.02
TNFRSF1A-213ENST00000540022 IFNA17P01571 189 aa14.96□□□□□ -0.02
TNFRSF1A-213ENST00000540022 GIPP09681 153 aaPredicted RBP14.96□□□□□ -0.02
TNFRSF1A-213ENST00000540022 NKX2-1P43699 371 aaPredicted RBP14.96□□□□□ -0.02
TNFRSF1A-213ENST00000540022 CYCSP99999 105 aaKnown RBP14.96□□□□□ -0.02
TNFRSF1A-213ENST00000540022 TNFRSF9Q07011 255 aa14.96□□□□□ -0.02
TNFRSF1A-213ENST00000540022 FXYD3Q14802 87 aa14.96□□□□□ -0.02
TNFRSF1A-213ENST00000540022 SPINK9Q5DT21 86 aa14.96□□□□□ -0.02
TNFRSF1A-213ENST00000540022 OR5B3Q8NH48 314 aa14.96□□□□□ -0.02
TNFRSF1A-213ENST00000540022 SRSF12Q8WXF0 261 aaKnown RBP14.96□□□□□ -0.02
TNFRSF1A-213ENST00000540022 JMJD8Q96S16 334 aa14.96□□□□□ -0.02
TNFRSF1A-213ENST00000540022 FAM181BA6NEQ2 426 aa14.95□□□□□ -0.02
TNFRSF1A-213ENST00000540022 LINC01548A6NM66 108 aa14.95□□□□□ -0.02
TNFRSF1A-213ENST00000540022 MBPP02686 304 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-213ENST00000540022 RNASE1P07998 156 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-213ENST00000540022 RPL27AP46776 148 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-213ENST00000540022 C9orf152Q5JTZ5 239 aa14.95□□□□□ -0.02
TNFRSF1A-213ENST00000540022 OR1L8Q8NGR8 309 aa14.95□□□□□ -0.02
TNFRSF1A-213ENST00000540022 OR52E5Q8NH55 327 aa14.95□□□□□ -0.02
TNFRSF1A-213ENST00000540022 FYTTD1Q96QD9 318 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-213ENST00000540022 FAM103A1Q9BTL3 118 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-213ENST00000540022 NDUFA4L2Q9NRX3 87 aa14.95□□□□□ -0.02
TNFRSF1A-213ENST00000540022 FBXO7Q9Y3I1 522 aa14.95□□□□□ -0.02
TNFRSF1A-213ENST00000540022 FAM90A26D6RGX4 464 aa14.94□□□□□ -0.02
TNFRSF1A-213ENST00000540022 SPCS3P61009 180 aa14.94□□□□□ -0.02
TNFRSF1A-213ENST00000540022 POLR2GP62487 172 aaKnown RBP eCLIP14.94□□□□□ -0.02
TNFRSF1A-213ENST00000540022 RAB32Q13637 225 aa14.94□□□□□ -0.02
TNFRSF1A-213ENST00000540022 PDLIM3Q53GG5 364 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF1A-213ENST00000540022 GRPEL2Q8TAA5 225 aa14.94□□□□□ -0.02
TNFRSF1A-213ENST00000540022 PPP1R1CQ8WVI7 109 aa14.94□□□□□ -0.02
TNFRSF1A-213ENST00000540022 ARPC1AQ92747 370 aa14.94□□□□□ -0.02
TNFRSF1A-213ENST00000540022 TAF15Q92804 592 aaKnown RBP eCLIP14.94□□□□□ -0.02
TNFRSF1A-213ENST00000540022 ST6GAL2Q96JF0 529 aa14.94□□□□□ -0.02
TNFRSF1A-213ENST00000540022 HINT2Q9BX68 163 aa14.94□□□□□ -0.02
TNFRSF1A-213ENST00000540022 NPFFR1Q9GZQ6 430 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms