RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 RBMXL1Q96E39 390 aaKnown RBP13.91□□□□□ -0.18
LTBR-207ENST00000539925 TREM1Q9NP99 234 aa13.91□□□□□ -0.18
LTBR-207ENST00000539925 IGHV2-5P01817 119 aa13.91□□□□□ -0.18
LTBR-207ENST00000539925 SPINK9Q5DT21 86 aa13.91□□□□□ -0.18
LTBR-207ENST00000539925 IGFBPL1Q8WX77 278 aa13.91□□□□□ -0.18
LTBR-207ENST00000539925 OOSP1A8MZH6 123 aa13.9□□□□□ -0.18
LTBR-207ENST00000539925 IFNA4P05014 189 aa13.9□□□□□ -0.18
LTBR-207ENST00000539925 CD5P06127 495 aa13.9□□□□□ -0.18
LTBR-207ENST00000539925 HTR1DP28221 377 aa13.9□□□□□ -0.18
LTBR-207ENST00000539925 CD1BP29016 333 aa13.9□□□□□ -0.18
LTBR-207ENST00000539925 MAS1LP35410 378 aa13.9□□□□□ -0.18
LTBR-207ENST00000539925 TMEM41BQ5BJD5 291 aa13.9□□□□□ -0.18
LTBR-207ENST00000539925 ZNF843Q8N446 348 aa13.9□□□□□ -0.18
LTBR-207ENST00000539925 OR4P4Q8NGL7 312 aa13.9□□□□□ -0.18
LTBR-207ENST00000539925 DPM3Q9P2X0 92 aa13.9□□□□□ -0.18
LTBR-207ENST00000539925 WDR83OSQ9Y284 106 aa13.9□□□□□ -0.18
LTBR-207ENST00000539925 IGHV1-3A0A0C4DH29 117 aa13.89□□□□□ -0.19
LTBR-207ENST00000539925 RNASEK-C17orf49H0YIS7 233 aa13.89□□□□□ -0.19
LTBR-207ENST00000539925 LY6LH3BQJ8 138 aa13.89□□□□□ -0.19
LTBR-207ENST00000539925 NDUFS8O00217 210 aa13.89□□□□□ -0.19
LTBR-207ENST00000539925 C1QL1O75973 258 aa13.89□□□□□ -0.19
LTBR-207ENST00000539925 MDKP21741 143 aaPredicted RBP13.89□□□□□ -0.19
LTBR-207ENST00000539925 FGF7P21781 194 aa13.89□□□□□ -0.19
LTBR-207ENST00000539925 ERHP84090 104 aaKnown RBP13.89□□□□□ -0.19
LTBR-207ENST00000539925 TUSC1Q2TAM9 212 aa13.89□□□□□ -0.19
LTBR-207ENST00000539925 PNKDQ8N490 385 aa13.89□□□□□ -0.19
LTBR-207ENST00000539925 Q8N7P7 452 aa13.89□□□□□ -0.19
LTBR-207ENST00000539925 RSG1Q9BU20 258 aa13.89□□□□□ -0.19
LTBR-207ENST00000539925 SEC11CQ9BY50 192 aa13.89□□□□□ -0.19
LTBR-207ENST00000539925 KIAA1456Q9P272 454 aa13.89□□□□□ -0.19
LTBR-207ENST00000539925 TEX50A0A1B0GTY4 177 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 FOXH1O75593 365 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 COX7A1P24310 79 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 ARF6P62330 175 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 C2orf83Q53S99 150 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 CCDC144NLQ6NUI1 221 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 CCL19Q99731 98 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 TSPAN9O75954 239 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 IGLV2-23P01705 113 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 FHITP49789 147 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 SUB1P53999 127 aaKnown RBP eCLIP13.88□□□□□ -0.19
LTBR-207ENST00000539925 RAB31Q13636 194 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 DIAPH2-AS1Q14236 149 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 C10orf91Q5T1B1 145 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 TPTE2P1Q5T6R2 138 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 MINOS1Q5TGZ0 78 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 MOB3BQ86TA1 216 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 MMD2Q8IY49 270 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 MBD3L1Q8WWY6 194 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 NDUFA4L2Q9NRX3 87 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 CARHSP1Q9Y2V2 147 aaKnown RBP13.88□□□□□ -0.19
LTBR-207ENST00000539925 MINOS1-NBL1R4GNA1 71 aa13.88□□□□□ -0.19
LTBR-207ENST00000539925 PRSS46E5RG02 174 aa13.87□□□□□ -0.19
LTBR-207ENST00000539925 RRHO14718 337 aa13.87□□□□□ -0.19
LTBR-207ENST00000539925 GUK1Q16774 197 aa13.87□□□□□ -0.19
LTBR-207ENST00000539925 SVBPQ8N300 66 aa13.87□□□□□ -0.19
LTBR-207ENST00000539925 HINT2Q9BX68 163 aa13.87□□□□□ -0.19
LTBR-207ENST00000539925 NPCDR1Q9BY65 106 aa13.87□□□□□ -0.19
LTBR-207ENST00000539925 NPVFQ9HCQ7 196 aa13.87□□□□□ -0.19
LTBR-207ENST00000539925 DOPEY1Q5JWR5 2465 aa13.86□□□□□ -0.19
LTBR-207ENST00000539925 ODF3BA8MYP8 253 aa13.86□□□□□ -0.19
LTBR-207ENST00000539925 NDUFS7O75251 213 aa13.86□□□□□ -0.19
LTBR-207ENST00000539925 APOC3P02656 99 aa13.86□□□□□ -0.19
LTBR-207ENST00000539925 BSXQ3C1V8 233 aa13.86□□□□□ -0.19
LTBR-207ENST00000539925 PIMREGQ9BSJ6 248 aa13.86□□□□□ -0.19
LTBR-207ENST00000539925 NARFLQ9H6Q4 476 aa13.86□□□□□ -0.19
LTBR-207ENST00000539925 RPRMQ9NS64 109 aa13.86□□□□□ -0.19
LTBR-207ENST00000539925 POLR3KQ9Y2Y1 108 aaPredicted RBP13.86□□□□□ -0.19
LTBR-207ENST00000539925 IGHV2-70DA0A0C4DH43 119 aa13.85□□□□□ -0.19
LTBR-207ENST00000539925 F8W036 122 aa13.85□□□□□ -0.19
LTBR-207ENST00000539925 AGPAT2O15120 278 aa13.85□□□□□ -0.19
LTBR-207ENST00000539925 ACTL6BO94805 426 aa13.85□□□□□ -0.19
LTBR-207ENST00000539925 CA2P00918 260 aa13.85□□□□□ -0.19
LTBR-207ENST00000539925 PMS2P11Q13670 270 aa13.85□□□□□ -0.19
LTBR-207ENST00000539925 ACOT6Q3I5F7 207 aaPredicted RBP13.85□□□□□ -0.19
LTBR-207ENST00000539925 SFT2D1Q8WV19 159 aa13.85□□□□□ -0.19
LTBR-207ENST00000539925 CACNG8Q8WXS5 425 aa13.85□□□□□ -0.19
LTBR-207ENST00000539925 BBC3Q96PG8 261 aaPredicted RBP13.85□□□□□ -0.19
LTBR-207ENST00000539925 BPESC1Q9GZL8 116 aa13.85□□□□□ -0.19
LTBR-207ENST00000539925 EIF5A2Q9GZV4 153 aaKnown RBP13.85□□□□□ -0.19
LTBR-207ENST00000539925 USP24Q9UPU5 2620 aa13.85□□□□□ -0.19
LTBR-207ENST00000539925 IGHV4-39P01824 125 aa13.85□□□□□ -0.19
LTBR-207ENST00000539925 M6PRP20645 277 aa13.85□□□□□ -0.19
LTBR-207ENST00000539925 TAGLN2P37802 199 aaKnown RBP13.85□□□□□ -0.19
LTBR-207ENST00000539925 SP5Q6BEB4 398 aaPredicted RBP13.85□□□□□ -0.19
LTBR-207ENST00000539925 SPSB3Q6PJ21 355 aa13.85□□□□□ -0.19
LTBR-207ENST00000539925 IGSF10Q6WRI0 2623 aa13.84□□□□□ -0.19
LTBR-207ENST00000539925 CYB5BO43169 146 aa13.84□□□□□ -0.19
LTBR-207ENST00000539925 SLC25A17O43808 307 aa13.84□□□□□ -0.19
LTBR-207ENST00000539925 OPRK1P41145 380 aa13.84□□□□□ -0.19
LTBR-207ENST00000539925 LMO4P61968 165 aa13.84□□□□□ -0.19
LTBR-207ENST00000539925 HABP2Q14520 560 aaPredicted RBP13.84□□□□□ -0.19
LTBR-207ENST00000539925 CLDND2Q8NHS1 167 aa13.84□□□□□ -0.19
LTBR-207ENST00000539925 RNASEH2CQ8TDP1 164 aaKnown RBP13.84□□□□□ -0.19
LTBR-207ENST00000539925 SRSF8Q9BRL6 282 aaKnown RBP13.84□□□□□ -0.19
LTBR-207ENST00000539925 ACTR3CQ9C0K3 210 aaPredicted RBP13.84□□□□□ -0.19
LTBR-207ENST00000539925 ZNF430Q9H8G1 570 aaPredicted RBP13.84□□□□□ -0.19
LTBR-207ENST00000539925 SIRT7Q9NRC8 400 aa13.84□□□□□ -0.19
LTBR-207ENST00000539925 TBL2Q9Y4P3 447 aaKnown RBP13.84□□□□□ -0.19
LTBR-207ENST00000539925 A0A1W2PPI3 338 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms