RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 DDB2Q92466 427 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 FLYWCH2Q96CP2 140 aaKnown RBP12.37□□□□□ -0.43
DDB1-216ENST00000539739 TNFRSF19Q9NS68 423 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 TCF19Q9Y242 345 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 TEX13DA0A0J9YY54 714 aaPredicted RBP12.37□□□□□ -0.43
DDB1-216ENST00000539739 TCF21O43680 179 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 TCRBP04435 133 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 F2RP25116 425 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 NUTF2P61970 127 aaKnown RBP12.37□□□□□ -0.43
DDB1-216ENST00000539739 GAGE1Q13065 139 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 LY6EQ16553 131 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 TMED4Q7Z7H5 227 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 OR4C13Q8NGP0 309 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 OR4S2Q8NH73 311 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 PCNPQ8WW12 178 aaKnown RBP12.37□□□□□ -0.43
DDB1-216ENST00000539739 EAF1Q96JC9 268 aaPredicted RBP12.37□□□□□ -0.43
DDB1-216ENST00000539739 VPREB3Q9UKI3 123 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 DNAJC9-AS1A6NH13 148 aa12.36□□□□□ -0.43
DDB1-216ENST00000539739 TSTD3H0UI37 97 aa12.36□□□□□ -0.43
DDB1-216ENST00000539739 AKR1C4P17516 323 aa12.36□□□□□ -0.43
DDB1-216ENST00000539739 TAS2R31P59538 309 aa12.36□□□□□ -0.43
DDB1-216ENST00000539739 SLC9A3R2Q15599 337 aa12.36□□□□□ -0.43
DDB1-216ENST00000539739 LIAT1Q6ZQX7 453 aa12.36□□□□□ -0.43
DDB1-216ENST00000539739 SGPP2Q8IWX5 399 aa12.36□□□□□ -0.43
DDB1-216ENST00000539739 SLC24A4Q8NFF2 622 aa12.36□□□□□ -0.43
DDB1-216ENST00000539739 THAP6Q8TBB0 222 aa12.36□□□□□ -0.43
DDB1-216ENST00000539739 PHYHIPLQ96FC7 376 aa12.36□□□□□ -0.43
DDB1-216ENST00000539739 RNF5Q99942 180 aa12.36□□□□□ -0.43
DDB1-216ENST00000539739 RAB18Q9NP72 206 aa12.36□□□□□ -0.43
DDB1-216ENST00000539739 A6NDX4 124 aa12.35□□□□□ -0.43
DDB1-216ENST00000539739 PRSS47A8MTI9 375 aa12.35□□□□□ -0.43
DDB1-216ENST00000539739 CLDN34H7C241 214 aa12.35□□□□□ -0.43
DDB1-216ENST00000539739 IGKV1-16P04430 117 aa12.35□□□□□ -0.43
DDB1-216ENST00000539739 RPS16P62249 146 aaKnown RBP12.35□□□□□ -0.43
DDB1-216ENST00000539739 NHLH2Q02577 135 aa12.35□□□□□ -0.43
DDB1-216ENST00000539739 PEA15Q15121 130 aa12.35□□□□□ -0.43
DDB1-216ENST00000539739 C16orf82Q7Z2V1 217 aa12.35□□□□□ -0.43
DDB1-216ENST00000539739 PUSL1Q8N0Z8 303 aaKnown RBP12.35□□□□□ -0.43
DDB1-216ENST00000539739 ADAD2Q8NCV1 583 aaKnown RBP12.35□□□□□ -0.43
DDB1-216ENST00000539739 BPIFCQ8NFQ6 507 aa12.35□□□□□ -0.43
DDB1-216ENST00000539739 RXFP4Q8TDU9 374 aa12.35□□□□□ -0.43
DDB1-216ENST00000539739 DUX5Q96PT3 197 aa12.35□□□□□ -0.43
DDB1-216ENST00000539739 C20orf85Q9H1P6 137 aa12.35□□□□□ -0.43
DDB1-216ENST00000539739 NAA60Q9H7X0 242 aa12.35□□□□□ -0.43
DDB1-216ENST00000539739 FAM212BQ9NTI7 297 aaPredicted RBP12.35□□□□□ -0.43
DDB1-216ENST00000539739 C1RLQ9NZP8 487 aa12.35□□□□□ -0.43
DDB1-216ENST00000539739 C3orf85A0A1B0GTC6 90 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 CRYM-AS1A6NIL9 109 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 A6NJY4 79 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 G3V3Q6 166 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 ARPC1BO15143 372 aaKnown RBP12.34□□□□□ -0.43
DDB1-216ENST00000539739 RBFOX2O43251 390 aaKnown RBP eCLIP12.34□□□□□ -0.43
DDB1-216ENST00000539739 OR2F2O95006 317 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 LGALS7P47929 136 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 TMEM128Q5BJH2 165 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 C9orf152Q5JTZ5 239 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 FAM74A1Q5RGS3 127 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 GSG1LQ6UXU4 331 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 TMEM219Q86XT9 240 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 OSR1Q8TAX0 266 aaPredicted RBP12.34□□□□□ -0.43
DDB1-216ENST00000539739 GGACTQ9BVM4 153 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 CHIAQ9BZP6 476 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 ESM1Q9NQ30 184 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 FLVCR2Q9UPI3 526 aa12.34□□□□□ -0.43
DDB1-216ENST00000539739 NCBP2LA6PVI3 153 aaKnown RBP12.33□□□□□ -0.43
DDB1-216ENST00000539739 H0Y980 276 aa12.33□□□□□ -0.43
DDB1-216ENST00000539739 HPRT1P00492 218 aa12.33□□□□□ -0.43
DDB1-216ENST00000539739 SERPINE2P07093 398 aa12.33□□□□□ -0.43
DDB1-216ENST00000539739 UBE2MP61081 183 aaKnown RBP12.33□□□□□ -0.43
DDB1-216ENST00000539739 MMDQ15546 238 aa12.33□□□□□ -0.43
DDB1-216ENST00000539739 TMEM177Q53S58 311 aa12.33□□□□□ -0.43
DDB1-216ENST00000539739 SLC25A42Q86VD7 318 aa12.33□□□□□ -0.43
DDB1-216ENST00000539739 HARBI1Q96MB7 349 aa12.33□□□□□ -0.43
DDB1-216ENST00000539739 SLC25A33Q9BSK2 321 aa12.33□□□□□ -0.43
DDB1-216ENST00000539739 NUDT15Q9NV35 164 aa12.33□□□□□ -0.43
DDB1-216ENST00000539739 KIAA1456Q9P272 454 aa12.33□□□□□ -0.43
DDB1-216ENST00000539739 ZFHX3Q15911 3703 aa12.33□□□□□ -0.44
DDB1-216ENST00000539739 CIDEAO60543 219 aa12.33□□□□□ -0.44
DDB1-216ENST00000539739 RAMP3O60896 148 aa12.33□□□□□ -0.44
DDB1-216ENST00000539739 HIST1H1BP16401 226 aaKnown RBP12.33□□□□□ -0.44
DDB1-216ENST00000539739 CXCL3P19876 107 aa12.33□□□□□ -0.44
DDB1-216ENST00000539739 BRWD1-AS2P59051 145 aa12.33□□□□□ -0.44
DDB1-216ENST00000539739 Q8N6K4 173 aa12.33□□□□□ -0.44
DDB1-216ENST00000539739 TMEM230Q96A57 120 aa12.33□□□□□ -0.44
DDB1-216ENST00000539739 SMCO4Q9NRQ5 59 aa12.33□□□□□ -0.44
DDB1-216ENST00000539739 MOB4Q9Y3A3 225 aa12.33□□□□□ -0.44
DDB1-216ENST00000539739 NIPBLQ6KC79 2804 aaeCLIP12.32□□□□□ -0.44
DDB1-216ENST00000539739 M0QZK8 103 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 AP4M1O00189 453 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 SSNA1O43805 119 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 OR2A4O95047 310 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 HRASP01112 189 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 RNASE1P07998 156 aaKnown RBP12.32□□□□□ -0.44
DDB1-216ENST00000539739 RPA2P15927 270 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 CXCL2P19875 107 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 DDTP30046 118 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 LPAR6P43657 344 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 FABP9Q0Z7S8 132 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 FBLN7Q53RD9 439 aa12.32□□□□□ -0.44
DDB1-216ENST00000539739 TMUB2Q71RG4 321 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms