RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 YTHDF2Q9Y5A9 579 aaKnown RBP11.56□□□□□ -0.56
UBE3B-210ENST00000539599 PPP5D1E7EU14 171 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 C17orf112F2Z3M2 114 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 TMEM250H0YL14 139 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 FRMD6-AS1P0C7T7 363 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 ERVK-16P61578 105 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 PDLIM3Q53GG5 364 aaPredicted RBP11.56□□□□□ -0.56
UBE3B-210ENST00000539599 LINC01551Q86U37 167 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 OR5B12Q96R08 314 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 MANBALQ9NQG1 85 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 JPT1Q9UK76 154 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 ABCA1O95477 2261 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 ZNF318Q5VUA4 2279 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 MBP02144 154 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 AMBPP02760 352 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 REG1BP48304 166 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 SPCS3P61009 180 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 CTDSP1Q9GZU7 261 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 SRD5A3Q9H8P0 318 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 GCM1Q9NP62 436 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 DYSFO75923 2080 aa11.55□□□□□ -0.56
UBE3B-210ENST00000539599 SRRM4A7MD48 611 aaKnown RBP11.55□□□□□ -0.56
UBE3B-210ENST00000539599 YPEL1O60688 119 aa11.55□□□□□ -0.56
UBE3B-210ENST00000539599 CA2P00918 260 aa11.55□□□□□ -0.56
UBE3B-210ENST00000539599 HRASP01112 189 aa11.55□□□□□ -0.56
UBE3B-210ENST00000539599 IGHV3-48P01763 117 aa11.55□□□□□ -0.56
UBE3B-210ENST00000539599 IGFBP2P18065 325 aa11.55□□□□□ -0.56
UBE3B-210ENST00000539599 YPEL2Q96QA6 119 aa11.55□□□□□ -0.56
UBE3B-210ENST00000539599 DDB2Q92466 427 aa11.55□□□□□ -0.56
UBE3B-210ENST00000539599 DMRT1Q9Y5R6 373 aa11.55□□□□□ -0.56
UBE3B-210ENST00000539599 MUC6Q6W4X9 2439 aa11.54□□□□□ -0.56
UBE3B-210ENST00000539599 TANC2Q9HCD6 1990 aa11.54□□□□□ -0.56
UBE3B-210ENST00000539599 ZNF891A8MT65 544 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-210ENST00000539599 IL3RAP26951 378 aa11.54□□□□□ -0.56
UBE3B-210ENST00000539599 FAM216AQ8WUB2 273 aa11.54□□□□□ -0.56
UBE3B-210ENST00000539599 TLN1Q9Y490 2541 aaKnown RBP11.54□□□□□ -0.56
UBE3B-210ENST00000539599 CUL9Q8IWT3 2517 aa11.54□□□□□ -0.56
UBE3B-210ENST00000539599 MBD3L4A6NDZ8 208 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-210ENST00000539599 MBD3L3A6NE82 208 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-210ENST00000539599 MBD3L5A6NJ08 208 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-210ENST00000539599 F2RL2O00254 374 aa11.54□□□□□ -0.56
UBE3B-210ENST00000539599 SLC17A3O00476 420 aa11.54□□□□□ -0.56
UBE3B-210ENST00000539599 LHBP01229 141 aa11.54□□□□□ -0.56
UBE3B-210ENST00000539599 IGHV1-46P01743 117 aa11.54□□□□□ -0.56
UBE3B-210ENST00000539599 IL6RP08887 468 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-210ENST00000539599 DLX1P56177 255 aa11.54□□□□□ -0.56
UBE3B-210ENST00000539599 STPG3Q8N7X2 389 aa11.54□□□□□ -0.56
UBE3B-210ENST00000539599 OR10W1Q8NGF6 305 aa11.54□□□□□ -0.56
UBE3B-210ENST00000539599 OR2T10Q8NGZ9 312 aa11.54□□□□□ -0.56
UBE3B-210ENST00000539599 MBD3L2Q8NHZ7 208 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-210ENST00000539599 ZCCHC14Q8WYQ9 949 aaKnown RBP11.54□□□□□ -0.56
UBE3B-210ENST00000539599 CD33P20138 364 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 MRPS11P82912 194 aaKnown RBP11.53□□□□□ -0.56
UBE3B-210ENST00000539599 TNFAIP6P98066 277 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-210ENST00000539599 HLA-DRB5Q30154 266 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 ZADH2Q8N4Q0 377 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 OR1P1Q8NH06 330 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 IDI2-AS1Q9NZ38 188 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 ZNF320A2RRD8 509 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 NUPR1O60356 82 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 CGB3P0DN86 165 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 CGB7P0DN87 165 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 NUBP1P53384 320 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 DIAPH2-AS1Q14236 149 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 MIR17HGQ75NE6 70 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 GAFA1Q96PS6 74 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 IMMP2LQ96T52 175 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 PYGO2Q9BRQ0 406 aa11.53□□□□□ -0.56
UBE3B-210ENST00000539599 C15orf61A6NNL5 157 aa11.52□□□□□ -0.56
UBE3B-210ENST00000539599 TMPRSS2O15393 492 aa11.52□□□□□ -0.56
UBE3B-210ENST00000539599 HIST1H1BP16401 226 aaKnown RBP11.52□□□□□ -0.56
UBE3B-210ENST00000539599 CCL3L1P16619 93 aa11.52□□□□□ -0.56
UBE3B-210ENST00000539599 NDUFB7P17568 137 aa11.52□□□□□ -0.56
UBE3B-210ENST00000539599 LRFN3Q9BTN0 628 aa11.52□□□□□ -0.56
UBE3B-210ENST00000539599 IGKV1OR2-108A0A075B7D4 117 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 ELOA3CA0A087WX78 387 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-210ENST00000539599 KBTBD11-OT1A0A1B0GTJ5 212 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 FCN3O75636 299 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 NPY1RP25929 384 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 CCKARP32238 428 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 GLRXP35754 106 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 OR5I1Q13606 314 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 EFNB3Q15768 340 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 LHFPL4Q7Z7J7 247 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 TMEM183AQ8IXX5 376 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 SLC24A4Q8NFF2 622 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 OR4P4Q8NGL7 312 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 OCC1Q8TAD7 63 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 PITPNC1Q9UKF7 332 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 SPTA1P02549 2419 aa11.52□□□□□ -0.57
UBE3B-210ENST00000539599 A0A1B0GWJ7 208 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 GRIFINA4D1Z8 144 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 ZNF705GA8MUZ8 300 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-210ENST00000539599 GPX4P36969 197 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-210ENST00000539599 PMS2P11Q13670 270 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 TIMM23BQ5SRD1 257 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 TMEM256Q8N2U0 113 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 OR4S2Q8NH73 311 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 DIRC2Q96SL1 478 aa11.51□□□□□ -0.57
UBE3B-210ENST00000539599 E7EUB6 86 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms