RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 OTOGLQ3ZCN5 2332 aa16.78■□□□□ 0.28
TMEM260-203ENST00000539559 FCN1O00602 326 aa16.78■□□□□ 0.28
TMEM260-203ENST00000539559 CXorf1O96002 111 aa16.78■□□□□ 0.28
TMEM260-203ENST00000539559 TMEM68Q96MH6 324 aa16.78■□□□□ 0.28
TMEM260-203ENST00000539559 SPAARA0A1B0GVQ0 90 aa16.77■□□□□ 0.28
TMEM260-203ENST00000539559 GFRA3O60609 400 aa16.77■□□□□ 0.28
TMEM260-203ENST00000539559 GCHFRP30047 84 aa16.77■□□□□ 0.28
TMEM260-203ENST00000539559 ZNF718Q3SXZ3 478 aa16.77■□□□□ 0.28
TMEM260-203ENST00000539559 C1orf229Q6ZS94 237 aaPredicted RBP16.77■□□□□ 0.28
TMEM260-203ENST00000539559 ICE1Q9Y2F5 2266 aa16.77■□□□□ 0.28
TMEM260-203ENST00000539559 ZNF318Q5VUA4 2279 aa16.77■□□□□ 0.28
TMEM260-203ENST00000539559 HEATR1Q9H583 2144 aaKnown RBP16.77■□□□□ 0.28
TMEM260-203ENST00000539559 IL6RP08887 468 aaPredicted RBP16.77■□□□□ 0.27
TMEM260-203ENST00000539559 VDAC2P45880 294 aaPredicted RBP16.77■□□□□ 0.27
TMEM260-203ENST00000539559 ZNF134P52741 427 aa16.77■□□□□ 0.27
TMEM260-203ENST00000539559 AHRRA9YTQ3 701 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 SNURFLB1AK76 121 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 PRSS46E5RG02 174 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 C15orf65H3BRN8 121 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 CGAP01215 116 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 NPSP0C0P6 89 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 TPPP2P59282 170 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 ARSJQ5FYB0 599 aaPredicted RBP16.76■□□□□ 0.27
TMEM260-203ENST00000539559 OR8I2Q8N0Y5 310 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 OR4P4Q8NGL7 312 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 SAMD10Q9BYL1 202 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 TIMM8AO60220 97 aaPredicted RBP16.76■□□□□ 0.27
TMEM260-203ENST00000539559 EFNB3Q15768 340 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 GABRA6Q16445 453 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 ALKBH2Q6NS38 261 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 HINT2Q9BX68 163 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 IL36BQ9NZH7 164 aa16.76■□□□□ 0.27
TMEM260-203ENST00000539559 IGHV3OR15-7A0A075B7D8 119 aa16.75■□□□□ 0.27
TMEM260-203ENST00000539559 TCL1AP56279 114 aa16.75■□□□□ 0.27
TMEM260-203ENST00000539559 TMEM208Q9BTX3 173 aa16.75■□□□□ 0.27
TMEM260-203ENST00000539559 SPINT2O43291 252 aa16.75■□□□□ 0.27
TMEM260-203ENST00000539559 FXYD3Q14802 87 aa16.75■□□□□ 0.27
TMEM260-203ENST00000539559 STPG3Q8N7X2 389 aa16.75■□□□□ 0.27
TMEM260-203ENST00000539559 LRFN3Q9BTN0 628 aa16.75■□□□□ 0.27
TMEM260-203ENST00000539559 TMEM140Q9NV12 185 aa16.75■□□□□ 0.27
TMEM260-203ENST00000539559 CADP27708 2225 aa16.75■□□□□ 0.27
TMEM260-203ENST00000539559 SVILO95425 2214 aa16.75■□□□□ 0.27
TMEM260-203ENST00000539559 EP300Q09472 2414 aaPredicted RBP16.75■□□□□ 0.27
TMEM260-203ENST00000539559 BOD1L1Q8NFC6 3051 aa16.75■□□□□ 0.27
TMEM260-203ENST00000539559 TRGV5A0A0B4J1U4 118 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 TFPI2P48307 235 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 RELBQ01201 579 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 DOLPP1Q86YN1 238 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 CNEP1R1Q8N9A8 125 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 ST6GALNAC3Q8NDV1 305 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 PPIAL4AQ9Y536 164 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 TNCP24821 2201 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 PRR33A8MZF0 331 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 SELENOTP62341 195 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 MIR17HGQ75NE6 70 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 MOB3BQ86TA1 216 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 LRRC29Q8WV35 223 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 TCF19Q9Y242 345 aa16.74■□□□□ 0.27
TMEM260-203ENST00000539559 KLF13Q9Y2Y9 288 aaPredicted RBP16.74■□□□□ 0.27
TMEM260-203ENST00000539559 TNFSF10P50591 281 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 KRTDAPP60985 99 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 MMD2Q8IY49 270 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 OR5AU1Q8NGC0 362 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 RNASE7Q9H1E1 156 aaKnown RBP16.73■□□□□ 0.27
TMEM260-203ENST00000539559 DUSP13Q9UII6 198 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 FBXL7Q9UJT9 491 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 IGFBP2P18065 325 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 GATA2P23769 480 aaPredicted RBP16.73■□□□□ 0.27
TMEM260-203ENST00000539559 LGALS4P56470 323 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 TMEM249Q2WGJ8 235 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 MORN2Q502X0 79 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 TEX43Q6ZNM6 134 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 EAF1Q96JC9 268 aaPredicted RBP16.73■□□□□ 0.27
TMEM260-203ENST00000539559 CXXC4Q9H2H0 198 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 KLRC4-KLRK1H3BQV0 150 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 TNFSF13O75888 250 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 RPLP1P05386 114 aaKnown RBP16.73■□□□□ 0.27
TMEM260-203ENST00000539559 COMPP49747 757 aaPredicted RBP16.73■□□□□ 0.27
TMEM260-203ENST00000539559 BTF3L4Q96K17 158 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 VAMP8Q9BV40 100 aa16.73■□□□□ 0.27
TMEM260-203ENST00000539559 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.72■□□□□ 0.27
TMEM260-203ENST00000539559 MPDU1O75352 247 aa16.72■□□□□ 0.27
TMEM260-203ENST00000539559 ERVK-16P61578 105 aa16.72■□□□□ 0.27
TMEM260-203ENST00000539559 ZNRF1Q8ND25 227 aa16.72■□□□□ 0.27
TMEM260-203ENST00000539559 MDS2Q8NDY4 140 aa16.72■□□□□ 0.27
TMEM260-203ENST00000539559 FAM216AQ8WUB2 273 aa16.72■□□□□ 0.27
TMEM260-203ENST00000539559 MIEN1Q9BRT3 115 aa16.72■□□□□ 0.27
TMEM260-203ENST00000539559 GNB4Q9HAV0 340 aa16.72■□□□□ 0.27
TMEM260-203ENST00000539559 SMG1Q96Q15 3661 aaKnown RBP16.72■□□□□ 0.27
TMEM260-203ENST00000539559 CRYBB3P26998 211 aa16.72■□□□□ 0.27
TMEM260-203ENST00000539559 PRDX2P32119 198 aa16.72■□□□□ 0.27
TMEM260-203ENST00000539559 TCTEX1D1Q8N7M0 179 aa16.72■□□□□ 0.27
TMEM260-203ENST00000539559 CD46P15529 392 aa16.71■□□□□ 0.27
TMEM260-203ENST00000539559 SPRNQ5BIV9 151 aa16.71■□□□□ 0.27
TMEM260-203ENST00000539559 RCHY1Q96PM5 261 aa16.71■□□□□ 0.27
TMEM260-203ENST00000539559 NPVFQ9HCQ7 196 aa16.71■□□□□ 0.27
TMEM260-203ENST00000539559 LSM4Q9Y4Z0 139 aaKnown RBP16.71■□□□□ 0.27
TMEM260-203ENST00000539559 RPP30P78346 268 aaKnown RBP16.71■□□□□ 0.26
TMEM260-203ENST00000539559 TCF15Q12870 199 aa16.71■□□□□ 0.26
TMEM260-203ENST00000539559 RPEL1Q2QD12 228 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms