RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 RPL8P62917 257 aaKnown RBP12.22□□□□□ -0.45
RPAIN-206ENST00000539417 TMEM65Q6PI78 240 aa12.22□□□□□ -0.45
RPAIN-206ENST00000539417 OR5M8Q8NGP6 311 aa12.22□□□□□ -0.45
RPAIN-206ENST00000539417 SEC22AQ96IW7 307 aa12.22□□□□□ -0.45
RPAIN-206ENST00000539417 FYTTD1Q96QD9 318 aaKnown RBP12.22□□□□□ -0.45
RPAIN-206ENST00000539417 PRRT1Q99946 306 aa12.22□□□□□ -0.45
RPAIN-206ENST00000539417 AKIP1Q9NQ31 210 aa12.22□□□□□ -0.45
RPAIN-206ENST00000539417 C3orf85A0A1B0GTC6 90 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 LINC00854A0A1B0GVQ3 168 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 H0Y980 276 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 I3L521 148 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 ACTL6BO94805 426 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 IGKV1-5P01602 117 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 IGHV3-11P01762 117 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 TPPP2P59282 170 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 OR2B8PP59922 312 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 ZNF57Q68EA5 555 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-206ENST00000539417 C1QL4Q86Z23 238 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 OR4A5Q8NH83 315 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 ZNF355PQ9NSJ1 428 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 PRR13Q9NZ81 148 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 COPZ2Q9P299 210 aa12.21□□□□□ -0.45
RPAIN-206ENST00000539417 TRGV3P03979 118 aa12.21□□□□□ -0.46
RPAIN-206ENST00000539417 REG1AP05451 166 aa12.21□□□□□ -0.46
RPAIN-206ENST00000539417 S100GP29377 79 aa12.21□□□□□ -0.46
RPAIN-206ENST00000539417 ZNF45Q02386 682 aa12.21□□□□□ -0.46
RPAIN-206ENST00000539417 MRPL41Q8IXM3 137 aaKnown RBP12.21□□□□□ -0.46
RPAIN-206ENST00000539417 LINC00482Q8N8I6 264 aa12.21□□□□□ -0.46
RPAIN-206ENST00000539417 GDPD1Q8N9F7 314 aa12.21□□□□□ -0.46
RPAIN-206ENST00000539417 LHFPL5Q8TAF8 219 aa12.21□□□□□ -0.46
RPAIN-206ENST00000539417 C4orf3Q8WVX3 66 aa12.21□□□□□ -0.46
RPAIN-206ENST00000539417 UBE2E2Q96LR5 201 aa12.21□□□□□ -0.46
RPAIN-206ENST00000539417 P2RX4Q99571 388 aa12.21□□□□□ -0.46
RPAIN-206ENST00000539417 FAM212BQ9NTI7 297 aaPredicted RBP12.21□□□□□ -0.46
RPAIN-206ENST00000539417 COA4Q9NYJ1 87 aa12.21□□□□□ -0.46
RPAIN-206ENST00000539417 G3V4G9 280 aa12.2□□□□□ -0.46
RPAIN-206ENST00000539417 CREBL2O60519 120 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-206ENST00000539417 PF4P02776 101 aa12.2□□□□□ -0.46
RPAIN-206ENST00000539417 OR5AC1P0C628 307 aa12.2□□□□□ -0.46
RPAIN-206ENST00000539417 MAS1LP35410 378 aa12.2□□□□□ -0.46
RPAIN-206ENST00000539417 ERVK-16P61578 105 aa12.2□□□□□ -0.46
RPAIN-206ENST00000539417 SURF2Q15527 256 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-206ENST00000539417 OR10W1Q8NGF6 305 aa12.2□□□□□ -0.46
RPAIN-206ENST00000539417 SPIN2AQ99865 258 aa12.2□□□□□ -0.46
RPAIN-206ENST00000539417 SPIN2BQ9BPZ2 258 aa12.2□□□□□ -0.46
RPAIN-206ENST00000539417 NAA60Q9H7X0 242 aa12.2□□□□□ -0.46
RPAIN-206ENST00000539417 SCP2D1Q9UJQ7 156 aa12.2□□□□□ -0.46
RPAIN-206ENST00000539417 C14orf166Q9Y224 244 aaKnown RBP12.2□□□□□ -0.46
RPAIN-206ENST00000539417 A0A0G2JRQ6 117 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 TEX50A0A1B0GTY4 177 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 CRYM-AS1A6NIL9 109 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 CCL24O00175 119 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 SERPINE2P07093 398 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 P0C879 139 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 IL7P13232 177 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 UCP1P25874 307 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 ECI1P42126 302 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 CCR6P51684 374 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 OXLD1Q5BKU9 147 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 TTC9CQ8N5M4 171 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 CCDC71LQ8N9Z2 235 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 WFDC9Q8NEX5 89 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 GLYATL2Q8WU03 294 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 AIFM2Q9BRQ8 373 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 PALMDQ9NP74 551 aa12.19□□□□□ -0.46
RPAIN-206ENST00000539417 IGLC7A0M8Q6 106 aa12.18□□□□□ -0.46
RPAIN-206ENST00000539417 IGLL1P15814 213 aa12.18□□□□□ -0.46
RPAIN-206ENST00000539417 BTCP35070 178 aa12.18□□□□□ -0.46
RPAIN-206ENST00000539417 MYCNOSP40205 109 aa12.18□□□□□ -0.46
RPAIN-206ENST00000539417 AP3S2P59780 193 aa12.18□□□□□ -0.46
RPAIN-206ENST00000539417 SUPT4H1P63272 117 aaKnown RBP12.18□□□□□ -0.46
RPAIN-206ENST00000539417 TRIQKQ629K1 86 aa12.18□□□□□ -0.46
RPAIN-206ENST00000539417 OR11H1Q8NG94 326 aa12.18□□□□□ -0.46
RPAIN-206ENST00000539417 S100ZQ8WXG8 99 aa12.18□□□□□ -0.46
RPAIN-206ENST00000539417 TMEM68Q96MH6 324 aa12.18□□□□□ -0.46
RPAIN-206ENST00000539417 NOTCH1P46531 2555 aa12.18□□□□□ -0.46
RPAIN-206ENST00000539417 TEX13DA0A0J9YY54 714 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-206ENST00000539417 AKR1C4P17516 323 aa12.17□□□□□ -0.46
RPAIN-206ENST00000539417 FAUP35544 74 aaKnown RBP12.17□□□□□ -0.46
RPAIN-206ENST00000539417 RUNX1Q01196 453 aa12.17□□□□□ -0.46
RPAIN-206ENST00000539417 FHL3Q13643 280 aa12.17□□□□□ -0.46
RPAIN-206ENST00000539417 TRIM16LQ309B1 348 aa12.17□□□□□ -0.46
RPAIN-206ENST00000539417 FANCD2OSQ96PS1 177 aa12.17□□□□□ -0.46
RPAIN-206ENST00000539417 WDR12Q9GZL7 423 aaKnown RBP12.17□□□□□ -0.46
RPAIN-206ENST00000539417 TMEM222Q9H0R3 208 aa12.17□□□□□ -0.46
RPAIN-206ENST00000539417 SLA2Q9H6Q3 261 aa12.17□□□□□ -0.46
RPAIN-206ENST00000539417 OR51B2Q9Y5P1 312 aa12.17□□□□□ -0.46
RPAIN-206ENST00000539417 DMRT1Q9Y5R6 373 aa12.17□□□□□ -0.46
RPAIN-206ENST00000539417 IGHV4OR15-8A0A075B7B6 117 aa12.16□□□□□ -0.46
RPAIN-206ENST00000539417 A0A087WW49 117 aa12.16□□□□□ -0.46
RPAIN-206ENST00000539417 H3BUA1 57 aa12.16□□□□□ -0.46
RPAIN-206ENST00000539417 PLA2G10O15496 165 aa12.16□□□□□ -0.46
RPAIN-206ENST00000539417 BRI3O95415 125 aa12.16□□□□□ -0.46
RPAIN-206ENST00000539417 TRBV12-3P01733 135 aa12.16□□□□□ -0.46
RPAIN-206ENST00000539417 LGALS1P09382 135 aaKnown RBP12.16□□□□□ -0.46
RPAIN-206ENST00000539417 CTRB1P17538 263 aa12.16□□□□□ -0.46
RPAIN-206ENST00000539417 CD33P20138 364 aa12.16□□□□□ -0.46
RPAIN-206ENST00000539417 PSMB6P28072 239 aa12.16□□□□□ -0.46
RPAIN-206ENST00000539417 SLC6A1P30531 599 aa12.16□□□□□ -0.46
RPAIN-206ENST00000539417 RAB25P57735 213 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms