RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 FAM90A1Q86YD7 464 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 SRXN1Q9BYN0 137 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 NAT8BQ9UHF3 227 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 ADAMTS20P59510 1910 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 ARHGAP21Q5T5U3 1957 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 C5orf42Q9H799 3197 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 TRAV38-1A0A0B4J264 116 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 SCO2A0A1W2PP80 73 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 A0A1W2PS18 150 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 OR5B21A6NL26 309 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 F2Z2F3 143 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 M0QXV9 152 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 OR10J4P0C629 311 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 ARL14EPLP0DKL9 152 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 THBS3P49746 956 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 GCNT2Q8N0V5 402 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 ZNF645Q8N7E2 425 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 C11orf52Q96A22 123 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 FGF23Q9GZV9 251 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-209ENST00000538654 TRAPPC2LQ9UL33 140 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 PPIAL4AQ9Y536 164 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 EML6Q6ZMW3 1958 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 LOC105371242A0A075B767 164 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 TRGV10A0A0A0MS01 117 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 SIRPB1O00241 398 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 SH2D1BO14796 132 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 SYNGR1O43759 233 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 ZG16O60844 167 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 CLDN14O95500 239 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 HLA-DQA1P01909 254 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 C3orf79P0CE67 100 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 GLB1P16278 677 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 PMCHP20382 165 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 CEACAM8P31997 349 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-209ENST00000538654 G6PCP35575 357 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 RHOBP62745 196 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 OR4A16Q8NH70 328 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 PKIBQ9C010 78 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 KCNIP1Q9NZI2 227 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 CD207Q9UJ71 328 aa7.54□□□□□ -1.2
SNHG1-209ENST00000538654 LAMA3Q16787 3333 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 SLC17A3O00476 420 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 NXPH2O95156 264 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 HINT1P49773 126 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-209ENST00000538654 EDDM3BP56851 147 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 CX3CL1P78423 397 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 NHLH1Q02575 133 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 ZNF497Q6ZNH5 498 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 H2BFWTQ7Z2G1 175 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 WDR31Q8NA23 367 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 FGFBP3Q8TAT2 258 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 RNF114Q9Y508 228 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 CHD7Q9P2D1 2997 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 PRDX2P32119 198 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 PLA2G5P39877 138 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 ZNF83P51522 516 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 RPL31P62899 125 aaKnown RBP7.53□□□□□ -1.2
SNHG1-209ENST00000538654 GNG3P63215 75 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 RNF151Q2KHN1 245 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 ZNF718Q3SXZ3 478 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 UNQ5815/PRO19632Q6UWF5 114 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 OR8I2Q8N0Y5 310 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 Q8N7P7 452 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 NUDT10Q8NFP7 164 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 RAX2Q96IS3 184 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 MRPL27Q9P0M9 148 aaKnown RBP7.53□□□□□ -1.2
SNHG1-209ENST00000538654 MPC1Q9Y5U8 109 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 MED12Q93074 2177 aa7.53□□□□□ -1.2
SNHG1-209ENST00000538654 TRAV9-2A0A087WT02 112 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 IGLC7A0M8Q6 106 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 ANKRD30BLA7E2S9 258 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 KLRC4-KLRK1H3BQV0 150 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 K7EN84 100 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 M0QZ24 198 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 CDIPTO14735 213 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 RBMXL2O75526 392 aaKnown RBP7.52□□□□□ -1.21
SNHG1-209ENST00000538654 SCRG1O75711 98 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 DEFA4P12838 97 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 SRD5A2P31213 254 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 OR4P4Q8NGL7 312 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 NUDT11Q96G61 164 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 TAAR6Q96RI8 345 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 PEF1Q9UBV8 284 aaKnown RBP7.52□□□□□ -1.21
SNHG1-209ENST00000538654 TNFRSF18Q9Y5U5 241 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 ARL2-SNX15V9GYD0 113 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 V9GYV3 84 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 UNC13CQ8NB66 2214 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 CA2P00918 260 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 GABRA2P47869 451 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 PSG7Q13046 419 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 SIGLEC15Q6ZMC9 328 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 TMEM136Q6ZRR5 245 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 NIT1Q86X76 327 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 Q8IYB0 196 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 ST6GALNAC3Q8NDV1 305 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 NRGNQ92686 78 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 CCDC140Q96MF4 163 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 DUX5Q96PT3 197 aa7.52□□□□□ -1.21
SNHG1-209ENST00000538654 MBNL3Q9NUK0 354 aaKnown RBP7.52□□□□□ -1.21
SNHG1-209ENST00000538654 C15orf62A8K5M9 175 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms