RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 RHOGP84095 191 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 ACTL10Q5JWF8 245 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 SPINK14Q6IE38 97 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 FADS6Q8N9I5 356 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 TMEM101Q96IK0 257 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 FOXD3Q9UJU5 478 aaPredicted RBP5.89□□□□□ -1.47
SORT1-209ENST00000538502 COL11A1P12107 1806 aaPredicted RBP5.89□□□□□ -1.47
SORT1-209ENST00000538502 J3KRW8 73 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 ASIPP42127 132 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 CKS1BP61024 79 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 CTHRC1Q96CG8 243 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 REG4Q9BYZ8 158 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 FNDC4Q9H6D8 234 aaPredicted RBP5.89□□□□□ -1.47
SORT1-209ENST00000538502 IGKV1D-42A0A075B6H8 117 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 FAM71F2Q6NXP2 309 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 TMEM52Q8NDY8 209 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 LPAR2Q9HBW0 351 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 WBP1LQ9NX94 342 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 NBEAP1P0C6P0 100 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 ECSCRQ19T08 205 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.89□□□□□ -1.47
SORT1-209ENST00000538502 OR9G1Q8NH87 305 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 GTF3AQ92664 365 aaKnown RBP5.89□□□□□ -1.47
SORT1-209ENST00000538502 RAX2Q96IS3 184 aa5.89□□□□□ -1.47
SORT1-209ENST00000538502 A0A1W2PRE2 83 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 COL9A1P20849 921 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 RTP5Q14D33 572 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 ACSF3Q4G176 576 aaPredicted RBP5.88□□□□□ -1.47
SORT1-209ENST00000538502 TMEM170BQ5T4T1 132 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 C16orf47Q6ZP98 133 aaPredicted RBP5.88□□□□□ -1.47
SORT1-209ENST00000538502 TEX45Q8NA69 505 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 MGST2Q99735 147 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 GP6Q9HCN6 339 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 C1QTNF9P0C862 333 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 SRSF1Q07955 248 aaKnown RBP eCLIP5.88□□□□□ -1.47
SORT1-209ENST00000538502 RRN3P1Q2M238 152 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 OVOL2Q9BRP0 275 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 IGHV1-45A0A0A0MS14 117 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 A0A0J9YW62 118 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 NPIPB11E5RHQ5 1161 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 AGFG2O95081 481 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 AMBPP02760 352 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 SSBP2P81877 361 aaPredicted RBP5.88□□□□□ -1.47
SORT1-209ENST00000538502 ATP5G2Q06055 141 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 SRSF4Q08170 494 aaKnown RBP5.88□□□□□ -1.47
SORT1-209ENST00000538502 GAGE2BQ13066 116 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 GAGE2EQ4V326 116 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 ORMDL2Q53FV1 153 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 LY6G6FQ5SQ64 297 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 C1orf185Q5T7R7 199 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 TTTY12Q9BZ98 90 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 GAGE2DQ9UEU5 116 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 SCN1AP35498 2009 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 TRBV6-7A0A0A0MS04 114 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 IGKV1-8A0A0C4DH67 115 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 CGAP01215 116 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 IGKCP01834 107 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 LINC00271P0C7V0 271 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 FAM106AQ4KMX7 169 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 FER1L6-AS1Q8NA97 138 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 NUP37Q8NFH4 326 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 SSBP3Q9BWW4 388 aaPredicted RBP5.88□□□□□ -1.47
SORT1-209ENST00000538502 PLA2G2FQ9BZM2 168 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 DICER1Q9UPY3 1922 aaKnown RBP5.88□□□□□ -1.47
SORT1-209ENST00000538502 C16orf97H3BN30 126 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 FAM159AQ6UWV7 190 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 RTN4RL2Q86UN3 420 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 DDB2Q92466 427 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 EAF1Q96JC9 268 aaPredicted RBP5.88□□□□□ -1.47
SORT1-209ENST00000538502 FAM117AQ9C073 453 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 ARRDC1-AS1Q9H2J1 176 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 MRPL27Q9P0M9 148 aaKnown RBP5.88□□□□□ -1.47
SORT1-209ENST00000538502 ANKRD36A6QL64 1941 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.88□□□□□ -1.47
SORT1-209ENST00000538502 C9JCJ5 164 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 RIPPLY3P57055 190 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 ZNF56Q15929 161 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 PRSS53Q2L4Q9 553 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 C1orf53Q5VUE5 145 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 SPRED2Q7Z698 418 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 OR13C6PQ8NH95 151 aa5.88□□□□□ -1.47
SORT1-209ENST00000538502 BEX4Q9NWD9 120 aaPredicted RBP5.88□□□□□ -1.47
SORT1-209ENST00000538502 TTC3P53804 2025 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 IGHV1-69-2A0A0G2JMI3 117 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 IGHV5-10-1A0A0J9YXX1 117 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 HIGD1CA8MV81 97 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 AHRRA9YTQ3 701 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 LEPP41159 167 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 RNFT1Q5M7Z0 435 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 Q5PR19 223 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 S100A7L2Q5SY68 101 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 ASCL2Q99929 193 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 KIAA1217Q5T5P2 1943 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 ATP5G3P48201 142 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 TFF3Q07654 80 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 LHX8Q68G74 356 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 ZNF479Q96JC4 524 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 TMEM74BQ9NUR3 256 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 NINQ8N4C6 2090 aa5.87□□□□□ -1.47
SORT1-209ENST00000538502 hCG_38984A0A1B0GV85 526 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms