RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 ISLRO14498 428 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 MPDU1O75352 247 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 HERVK_113P61574 105 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 AWAT1Q58HT5 328 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 CYP2G1PQ6ZSU1 146 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 SLC25A15Q9Y619 301 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 KIAA1671Q9BY89 1806 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 MBNL2Q5VZF2 373 aaKnown RBP4.49□□□□□ -1.69
LRP6-203ENST00000538239 OSR1Q8TAX0 266 aaPredicted RBP4.49□□□□□ -1.69
LRP6-203ENST00000538239 LYRM2Q9NU23 88 aaPredicted RBP4.49□□□□□ -1.69
LRP6-203ENST00000538239 TNFSF18Q9UNG2 199 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 SEC16AO15027 2179 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 RALGAPA1Q6GYQ0 2036 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.49□□□□□ -1.69
LRP6-203ENST00000538239 TM2D1Q9BX74 207 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 C21orf62Q9NYP8 219 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 NLRC5Q86WI3 1866 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 SNURFLB1AK76 121 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 TSC2P49815 1807 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 CD300CQ08708 224 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 FAM159AQ6UWV7 190 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 PQLC2Q6ZP29 291 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 STHQ8IWL8 128 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 FBLIM1Q8WUP2 373 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 ISOC2Q96AB3 205 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 Q96MF0 132 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 LY6G6EA0A0G2JKS1 128 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 TIMM23O14925 209 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 ZNF253O75346 499 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 WNT2P09544 360 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 MFAP2P55001 183 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 TCF15Q12870 199 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 HERPUD1Q15011 391 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 WDR25Q64LD2 544 aaPredicted RBP4.49□□□□□ -1.69
LRP6-203ENST00000538239 GOLT1AQ6ZVE7 132 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 H1FOOQ8IZA3 346 aaPredicted RBP4.49□□□□□ -1.69
LRP6-203ENST00000538239 LINC01587Q99440 93 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 U3KQA8 63 aa4.49□□□□□ -1.69
LRP6-203ENST00000538239 H3BQ15 152 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 C1QL1O75973 258 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 CFDP00746 253 aaPredicted RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 SAA1P0DJI8 122 aaPredicted RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 C8orf88P0DMB2 117 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 CRISP2P16562 243 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 SRD5A1P18405 259 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 RNASE4P34096 147 aaKnown RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 SMAGPQ0VAQ4 97 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 GLMPQ8WWB7 406 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 NABP2Q9BQ15 211 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 MAP1LC3CQ9BXW4 147 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 SH3BGRL3Q9H299 93 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 PPP1R3EQ9H7J1 279 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 RP1L1Q8IWN7 2480 aaPredicted RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 BRWD1Q9NSI6 2320 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 A0A087WV48 116 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 FAM90A26D6RGX4 464 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 LYPD3O95274 346 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 PRB1P04280 392 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 FOSL1P15407 271 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 PNRC1Q12796 327 aaPredicted RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 C3orf36Q3SXR2 165 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 Q5PR19 223 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 LDLRAD2Q5SZI1 272 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 GTSCR1Q86UQ5 136 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 KLHDC3Q9BQ90 382 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 WDR81Q562E7 1941 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 B4DSR2 109 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 SEC11BP0C7V7 166 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 SERF2P84101 59 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 FAM74A3Q4VXF1 159 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 IBA57Q5T440 356 aaKnown RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 SCGB1D4Q6XE38 83 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 C19orf35Q6ZS72 473 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 HSD17B13Q7Z5P4 300 aaPredicted RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 C9orf62Q8N4C0 152 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 PACRGQ96M98 296 aaPredicted RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 MDC1Q14676 2089 aaKnown RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 A0A1B0GTI1 187 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 MBD3L4A6NDZ8 208 aaPredicted RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 MBD3L3A6NE82 208 aaPredicted RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 MBD3L5A6NJ08 208 aaPredicted RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 NPIPB6E9PJ23 425 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 NPFFO15130 113 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 SELLP14151 372 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 COL8A2P25067 703 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 HIST3H3Q16695 136 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 RPRMLQ8N4K4 120 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 KLHDC1Q8N7A1 406 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 MBD3L2Q8NHZ7 208 aaPredicted RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 GPR82Q96P67 336 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 FUT9Q9Y231 359 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 ARHGEF17Q96PE2 2063 aaPredicted RBP4.48□□□□□ -1.69
LRP6-203ENST00000538239 CBY3A6NI87 242 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 M0QZK8 103 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 RAB9AP51151 201 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 ICAM4Q14773 271 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 TMEM177Q53S58 311 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 CD200R1LQ6Q8B3 271 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 LHFPL5Q8TAF8 219 aa4.48□□□□□ -1.69
LRP6-203ENST00000538239 IFI27L2Q9H2X8 130 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms