RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 GRB2P62993 217 aaKnown RBP9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 DMRTC1Q5HYR2 192 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 TMEM52Q8NDY8 209 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 LSM10Q969L4 123 aaKnown RBP9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 SMIM10Q96HG1 83 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 ARHGEF17Q96PE2 2063 aaPredicted RBP9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 A0A1W2PR80 420 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 H0Y8G0 127 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 ARL3P36405 182 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 OR1C1Q15619 314 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 ASCL4Q6XD76 172 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 OCC1Q8TAD7 63 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 NEUROG1Q92886 237 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 LINC00470Q9BZP3 86 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 SLC7A10Q9NS82 523 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 NOTCH2Q04721 2471 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 IGKV1-9A0A0C4DH69 117 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 J3KRW8 73 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 J3QKU1 62 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 FOXS1O43638 330 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 IGKV1D-33P01593 117 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 IGKV1-33P01594 117 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 GATA2P23769 480 aaPredicted RBP9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 AESQ08117 197 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 MYBPHQ13203 477 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 ABHD17AQ96GS6 310 aa9.16□□□□□ -0.94
CLSTN3-207ENST00000537408 A0A087X0K7 114 aa9.15□□□□□ -0.94
CLSTN3-207ENST00000537408 NPPCP23582 126 aa9.15□□□□□ -0.94
CLSTN3-207ENST00000537408 ZNF114Q8NC26 417 aa9.15□□□□□ -0.94
CLSTN3-207ENST00000537408 OR4A5Q8NH83 315 aa9.15□□□□□ -0.94
CLSTN3-207ENST00000537408 PERPQ96FX8 193 aa9.15□□□□□ -0.94
CLSTN3-207ENST00000537408 FAM208BQ5VWN6 2430 aa9.15□□□□□ -0.94
CLSTN3-207ENST00000537408 TM4SF5O14894 197 aa9.15□□□□□ -0.94
CLSTN3-207ENST00000537408 SSTR5P35346 364 aa9.15□□□□□ -0.94
CLSTN3-207ENST00000537408 TMEM204Q9BSN7 226 aa9.15□□□□□ -0.94
CLSTN3-207ENST00000537408 MRPL16Q9NX20 251 aaKnown RBP9.15□□□□□ -0.94
CLSTN3-207ENST00000537408 PIGLQ9Y2B2 252 aa9.15□□□□□ -0.94
CLSTN3-207ENST00000537408 ANKRD30BLA7E2S9 258 aa9.15□□□□□ -0.95
CLSTN3-207ENST00000537408 CCL1P22362 96 aa9.15□□□□□ -0.95
CLSTN3-207ENST00000537408 REG1BP48304 166 aa9.15□□□□□ -0.95
CLSTN3-207ENST00000537408 BRICD5Q6PL45 260 aa9.15□□□□□ -0.95
CLSTN3-207ENST00000537408 DGAT2L6Q6ZPD8 337 aa9.15□□□□□ -0.95
CLSTN3-207ENST00000537408 TMEM136Q6ZRR5 245 aa9.15□□□□□ -0.95
CLSTN3-207ENST00000537408 OR2T6Q8NHC8 308 aa9.15□□□□□ -0.95
CLSTN3-207ENST00000537408 BLNKQ8WV28 456 aa9.15□□□□□ -0.95
CLSTN3-207ENST00000537408 BORCS8Q96FH0 119 aa9.15□□□□□ -0.95
CLSTN3-207ENST00000537408 DKK4Q9UBT3 224 aa9.15□□□□□ -0.95
CLSTN3-207ENST00000537408 LHFPL6Q9Y693 200 aa9.15□□□□□ -0.95
CLSTN3-207ENST00000537408 OR11H12B2RN74 326 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 GNG4P50150 75 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 ARL16Q0P5N6 197 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 MFAP5Q13361 173 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 COLCA1Q6ZS62 124 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 H1FNTQ75WM6 255 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 MOB1BQ7L9L4 216 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 OR11H1Q8NG94 326 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 OR11H2Q8NH07 326 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 TMEM45BQ96B21 275 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 TM4SF19Q96DZ7 209 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 C5orf30Q96GV9 206 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 EMC6Q9BV81 110 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 ZNF257Q9Y2Q1 563 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 CX3CL1P78423 397 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 OR1F12Q8NHA8 337 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 SERTAD4Q9NUC0 356 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 CRIM1Q9NZV1 1036 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 F2RL2O00254 374 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 HBZP02008 142 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 ZNF16P17020 682 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 TNXAQ16473 311 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 CCDC144NLQ6NUI1 221 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 ZNF818PQ6ZRF7 136 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 ANKRD37Q7Z713 158 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 IL36GQ9NZH8 169 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 ERRFI1Q9UJM3 462 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 TEX48A0A1B0GUV7 120 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 DHRS3O75911 302 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 C16orf47Q6ZP98 133 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 LY96Q9Y6Y9 160 aa9.14□□□□□ -0.95
CLSTN3-207ENST00000537408 hDV102S1A0JD36 115 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 BMPR1BO00238 502 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 PDCD6O75340 191 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 FUT7Q11130 342 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 TMEM177Q53S58 311 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 EBLN2Q6P2I7 272 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 OR51H1Q8NH63 302 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 NGBQ9NPG2 151 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 IGFBP7Q16270 282 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 IGF2-ASQ6U949 168 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 OSR2Q8N2R0 312 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 MAP1LC3CQ9BXW4 147 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 KCNS2Q9ULS6 477 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 CRYGCP07315 174 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 TIGITQ495A1 244 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 CCL28Q9NRJ3 127 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 SS18L2Q9UHA2 77 aa9.13□□□□□ -0.95
CLSTN3-207ENST00000537408 HRKO00198 91 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 F2RP25116 425 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 SRSF7Q16629 238 aaKnown RBP eCLIP9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 C18orf32Q8TCD1 76 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms