RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 ST8SIA3O43173 380 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 DHFRP00374 187 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 PRM2P04554 102 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 DEFB130BP0DP73 79 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 DEFB130AP0DP74 79 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 GNB3P16520 340 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 LORP23490 312 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-217ENST00000537162 PRDX6P30041 224 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 ZNF93P35789 620 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-217ENST00000537162 RASSF2P50749 326 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 PSMD7P51665 324 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 MNAT1P51948 309 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 SNRPGP62308 76 aaKnown RBP6.39□□□□□ -1.39
CPSF7-217ENST00000537162 EFNB1P98172 346 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 RTL8BQ17RB0 113 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 OR2T5Q6IEZ7 315 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 ZNF880Q6PDB4 577 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 SCXQ7RTU7 201 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 HS3ST5Q8IZT8 346 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 OR6M1Q8NGM8 313 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 OR2T29Q8NH02 315 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 SETD6Q8TBK2 473 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 ORAI1Q96D31 301 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 DGCR14Q96DF8 476 aaKnown RBP6.39□□□□□ -1.39
CPSF7-217ENST00000537162 CPNE2Q96FN4 548 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-217ENST00000537162 FAAP24Q9BTP7 215 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 TRAV14DV4A0A0A6YYC5 116 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 IGKV1-6A0A0C4DH72 117 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 PDCD6O75340 191 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 YIF1AO95070 293 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 C1QBP02746 253 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 CTSGP08311 255 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 HTR1AP08908 422 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 COX4I1P13073 169 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 PRKACGP22612 351 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 ZBTB25P24278 435 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 FGF9P31371 208 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-217ENST00000537162 ALDH3B2P48448 385 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 CBX3Q13185 183 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 FCN2Q15485 313 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 DDI2Q5TDH0 399 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 UBAC2Q8NBM4 344 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 DUSP18Q8NEJ0 188 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 S100A13Q99584 98 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 THTPAQ9BU02 230 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 JAM3Q9BX67 310 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 SELENOIQ9C0D9 397 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 VSIRQ9H7M9 311 aa6.38□□□□□ -1.39
CPSF7-217ENST00000537162 H2AFY2Q9P0M6 372 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-217ENST00000537162 ZNF780AO75290 641 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-217ENST00000537162 GLAP06280 429 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 CALB2P22676 271 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 SPSB3Q6PJ21 355 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-217ENST00000537162 STXBP6Q8NFX7 210 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 VN1R17PQ8TDU5 208 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 FCGR1BQ92637 280 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 CMTM5Q96DZ9 223 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 GRAMD2BQ96HH9 432 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 Q96M66 194 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 PDCD1LG2Q9BQ51 273 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 OR2D2Q9H210 308 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 OR51E2Q9H255 320 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 ARL8BQ9NVJ2 186 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 PAK1IP1Q9NWT1 392 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-217ENST00000537162 RDH8Q9NYR8 311 aa6.37□□□□□ -1.39
CPSF7-217ENST00000537162 LRCOL1A6NCL2 159 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 ERICH4A6NGS2 130 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 H3BMM0 161 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 CREBL2O60519 120 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-217ENST00000537162 NAPSAO96009 420 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 CD3GP09693 182 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 RRASP10301 218 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 MGMTP16455 207 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 PSMG4Q5JS54 123 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 GLIPR1L1Q6UWM5 242 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 CYP2R1Q6VVX0 501 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 HACD2Q6Y1H2 254 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 C6orf201Q7Z4U5 140 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 C1orf158Q8N1D5 194 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 OSR1Q8TAX0 266 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-217ENST00000537162 DCANP1Q8TF63 244 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 SCARB1Q8WTV0 552 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 MUL1Q969V5 352 aa6.36□□□□□ -1.39
CPSF7-217ENST00000537162 HDHD3Q9BSH5 251 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-217ENST00000537162 IGLC7A0M8Q6 106 aa6.35□□□□□ -1.39
CPSF7-217ENST00000537162 DBX1A6NMT0 343 aa6.35□□□□□ -1.39
CPSF7-217ENST00000537162 M0QYG6 137 aa6.35□□□□□ -1.39
CPSF7-217ENST00000537162 KBTBD11O94819 623 aa6.35□□□□□ -1.39
CPSF7-217ENST00000537162 IGKV3-20P01619 116 aa6.35□□□□□ -1.39
CPSF7-217ENST00000537162 DUTP33316 252 aaKnown RBP6.35□□□□□ -1.39
CPSF7-217ENST00000537162 DEFB1P60022 68 aa6.35□□□□□ -1.39
CPSF7-217ENST00000537162 NUTF2P61970 127 aaKnown RBP6.35□□□□□ -1.39
CPSF7-217ENST00000537162 HLA-DRB3P79483 266 aa6.35□□□□□ -1.39
CPSF7-217ENST00000537162 DNAL1Q4LDG9 190 aa6.35□□□□□ -1.39
CPSF7-217ENST00000537162 NTN5Q8WTR8 489 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-217ENST00000537162 ZNF184Q99676 751 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-217ENST00000537162 TEX12Q9BXU0 123 aa6.35□□□□□ -1.39
CPSF7-217ENST00000537162 EFCAB1Q9HAE3 211 aa6.35□□□□□ -1.39
CPSF7-217ENST00000537162 C21orf62Q9NYP8 219 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms