RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 IDO2Q6ZQW0 420 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 SECTM1Q8WVN6 248 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 TCTEX1D2Q8WW35 142 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 SRSF12Q8WXF0 261 aaKnown RBP5.41□□□□□ -1.54
YBX3-206ENST00000536823 DCUN1D4Q92564 292 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 SNAPC3Q92966 411 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 TMEM68Q96MH6 324 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 MS4A10Q96PG2 267 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 HSD17B10Q99714 261 aaKnown RBP5.41□□□□□ -1.54
YBX3-206ENST00000536823 ANAPC10Q9UM13 185 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 DNAH7Q8WXX0 4024 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 A0A0G2JLM5 398 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 C13orf42A0A1B0GVH6 325 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 TRIAP1O43715 76 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 PPYP01298 95 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 HSPB1P04792 205 aaKnown RBP5.4□□□□□ -1.54
YBX3-206ENST00000536823 SMIM18P0DKX4 95 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 FCGR2CP31995 323 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 KIR2DS2P43631 304 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 TAS2R20P59543 309 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 NCS1P62166 190 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 CD300EQ496F6 205 aaPredicted RBP5.4□□□□□ -1.54
YBX3-206ENST00000536823 TMEM69Q5SWH9 247 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 MMD2Q8IY49 270 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 SAMD12Q8N8I0 201 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 ADAD2Q8NCV1 583 aaKnown RBP5.4□□□□□ -1.54
YBX3-206ENST00000536823 OR5T1Q8NG75 326 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 OR5AP2Q8NGF4 316 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 OR13F1Q8NGS4 319 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 ACOT12Q8WYK0 555 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 DLX4Q92988 240 aaPredicted RBP5.4□□□□□ -1.54
YBX3-206ENST00000536823 SLC25A46Q96AG3 418 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 PRR25Q96S07 402 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 B9D2Q9BPU9 175 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 FUNDC2Q9BWH2 189 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 SLC5A7Q9GZV3 580 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 ZNF430Q9H8G1 570 aaPredicted RBP5.4□□□□□ -1.54
YBX3-206ENST00000536823 HEYLQ9NQ87 328 aaPredicted RBP5.4□□□□□ -1.54
YBX3-206ENST00000536823 IFT46Q9NQC8 304 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 ZNF355PQ9NSJ1 428 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 TAS2R8Q9NYW2 309 aa5.4□□□□□ -1.54
YBX3-206ENST00000536823 NBEAL2Q6ZNJ1 2754 aa5.4□□□□□ -1.55
YBX3-206ENST00000536823 MEIS3P1A6NDR6 274 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 MSGN1A6NI15 193 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 RBFOX2O43251 390 aaKnown RBP eCLIP5.39□□□□□ -1.55
YBX3-206ENST00000536823 SAP30O75446 220 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 ACTL6BO94805 426 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 KBTBD11O94819 623 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 FCER2P06734 321 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 OR9G9P0C7N8 305 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 APELAP0DMC3 54 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 ZP3P21754 424 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 BRWD1-AS2P59051 145 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 TAS2R46P59540 309 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 FXYD4P59646 89 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 HERV-K104P61576 105 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 VBP1P61758 197 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 DEFA5Q01523 94 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 DEFB121Q5J5C9 76 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 C10orf55Q5SWW7 151 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 ACSM6Q6P461 480 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 ZNF429Q86V71 674 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 TMEM17Q86X19 198 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 PUSL1Q8N0Z8 303 aaKnown RBP5.39□□□□□ -1.55
YBX3-206ENST00000536823 VSTM2AQ8TAG5 236 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 TMEM167AQ8TBQ9 72 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 GIMAP1Q8WWP7 306 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 S100A16Q96FQ6 103 aaKnown RBP5.39□□□□□ -1.55
YBX3-206ENST00000536823 USMG5Q96IX5 58 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 PHB2Q99623 299 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 SPIN2AQ99865 258 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 SPIN2BQ9BPZ2 258 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 DCUN1D5Q9BTE7 237 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 CCL28Q9NRJ3 127 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 COA4Q9NYJ1 87 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 EHFQ9NZC4 300 aa5.39□□□□□ -1.55
YBX3-206ENST00000536823 ZNF256Q9Y2P7 627 aaPredicted RBP5.39□□□□□ -1.55
YBX3-206ENST00000536823 TRGV11A0A075B6L2 103 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 TRBV9A0A0B4J1U6 114 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 FAM223BA6NKX1 122 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 TEX22C9J3V5 150 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 F5H697 171 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 MPPED1O15442 326 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 TNFSF12O43508 249 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 RBMXL2O75526 392 aaKnown RBP5.38□□□□□ -1.55
YBX3-206ENST00000536823 OR2A4O95047 310 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 GABARAPO95166 117 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 HRASP01112 189 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 APOA1P02647 267 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 EIF4EP06730 217 aaKnown RBP5.38□□□□□ -1.55
YBX3-206ENST00000536823 PRSS3P35030 304 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 MAS1LP35410 378 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 RPL27AP46776 148 aaKnown RBP5.38□□□□□ -1.55
YBX3-206ENST00000536823 CATR1Q13166 79 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 ZNF343Q6P1L6 599 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 MZT2AQ6P582 158 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 SLC25A42Q86VD7 318 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 FAM223AQ8IWN6 122 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 VKORC1L1Q8N0U8 176 aa5.38□□□□□ -1.55
YBX3-206ENST00000536823 SPAG16Q8N0X2 631 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms