RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 LHX4Q969G2 390 aa18.4■□□□□ 0.54
HMGA2-206ENST00000536545 GGACTQ9BVM4 153 aa18.4■□□□□ 0.54
HMGA2-206ENST00000536545 CLEC7AQ9BXN2 247 aa18.4■□□□□ 0.54
HMGA2-206ENST00000536545 NPCDR1Q9BY65 106 aa18.4■□□□□ 0.54
HMGA2-206ENST00000536545 PATZ1Q9HBE1 687 aaKnown RBP18.4■□□□□ 0.54
HMGA2-206ENST00000536545 WDR83OSQ9Y284 106 aa18.4■□□□□ 0.54
HMGA2-206ENST00000536545 ACSM6Q6P461 480 aa18.4■□□□□ 0.54
HMGA2-206ENST00000536545 SSX7Q7RTT5 188 aa18.4■□□□□ 0.54
HMGA2-206ENST00000536545 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.4■□□□□ 0.54
HMGA2-206ENST00000536545 BEND2Q8NDZ0 799 aa18.4■□□□□ 0.54
HMGA2-206ENST00000536545 MBD3L1Q8WWY6 194 aa18.4■□□□□ 0.54
HMGA2-206ENST00000536545 ENY2Q9NPA8 101 aa18.4■□□□□ 0.54
HMGA2-206ENST00000536545 LIPFP07098 398 aa18.39■□□□□ 0.53
HMGA2-206ENST00000536545 NPY1RP25929 384 aa18.39■□□□□ 0.53
HMGA2-206ENST00000536545 CDKN1AP38936 164 aa18.39■□□□□ 0.53
HMGA2-206ENST00000536545 DLK1P80370 383 aa18.39■□□□□ 0.53
HMGA2-206ENST00000536545 OR5B3Q8NH48 314 aa18.39■□□□□ 0.53
HMGA2-206ENST00000536545 PLEKHA3Q9HB20 300 aa18.39■□□□□ 0.53
HMGA2-206ENST00000536545 FKBP11Q9NYL4 201 aa18.39■□□□□ 0.53
HMGA2-206ENST00000536545 KPTNQ9Y664 436 aa18.39■□□□□ 0.53
HMGA2-206ENST00000536545 IGKV1D-33P01593 117 aa18.38■□□□□ 0.53
HMGA2-206ENST00000536545 IGKV1-33P01594 117 aa18.38■□□□□ 0.53
HMGA2-206ENST00000536545 IGLV2-23P01705 113 aa18.38■□□□□ 0.53
HMGA2-206ENST00000536545 CD1BP29016 333 aa18.38■□□□□ 0.53
HMGA2-206ENST00000536545 PRRX1P54821 245 aa18.38■□□□□ 0.53
HMGA2-206ENST00000536545 RAB2AP61019 212 aa18.38■□□□□ 0.53
HMGA2-206ENST00000536545 RAB11AP62491 216 aa18.38■□□□□ 0.53
HMGA2-206ENST00000536545 Q8N7P7 452 aa18.38■□□□□ 0.53
HMGA2-206ENST00000536545 OR4A5Q8NH83 315 aa18.38■□□□□ 0.53
HMGA2-206ENST00000536545 SMDT1Q9H4I9 107 aa18.38■□□□□ 0.53
HMGA2-206ENST00000536545 USP24Q9UPU5 2620 aa18.38■□□□□ 0.53
HMGA2-206ENST00000536545 TEX50A0A1B0GTY4 177 aa18.37■□□□□ 0.53
HMGA2-206ENST00000536545 RBFOX3A6NFN3 312 aa18.37■□□□□ 0.53
HMGA2-206ENST00000536545 TMEM167AQ8TBQ9 72 aa18.37■□□□□ 0.53
HMGA2-206ENST00000536545 RARRES2Q99969 163 aa18.37■□□□□ 0.53
HMGA2-206ENST00000536545 ONECUT1Q9UBC0 465 aa18.37■□□□□ 0.53
HMGA2-206ENST00000536545 DNASE2O00115 360 aaPredicted RBP18.37■□□□□ 0.53
HMGA2-206ENST00000536545 MC5RP33032 325 aa18.37■□□□□ 0.53
HMGA2-206ENST00000536545 PRB3Q04118 309 aaPredicted RBP18.37■□□□□ 0.53
HMGA2-206ENST00000536545 HNF4GQ14541 408 aa18.37■□□□□ 0.53
HMGA2-206ENST00000536545 CLDND2Q8NHS1 167 aa18.37■□□□□ 0.53
HMGA2-206ENST00000536545 HINT2Q9BX68 163 aa18.37■□□□□ 0.53
HMGA2-206ENST00000536545 TNCP24821 2201 aa18.36■□□□□ 0.53
HMGA2-206ENST00000536545 hCG_1809904A0A1W2PP81 198 aa18.36■□□□□ 0.53
HMGA2-206ENST00000536545 A0A1W2PPE2 198 aa18.36■□□□□ 0.53
HMGA2-206ENST00000536545 A0A1W2PR64 198 aa18.36■□□□□ 0.53
HMGA2-206ENST00000536545 A0A1W2PRV1 198 aa18.36■□□□□ 0.53
HMGA2-206ENST00000536545 SNAPINO95295 136 aa18.36■□□□□ 0.53
HMGA2-206ENST00000536545 CA2P00918 260 aa18.36■□□□□ 0.53
HMGA2-206ENST00000536545 USF1P22415 310 aaPredicted RBP18.36■□□□□ 0.53
HMGA2-206ENST00000536545 COX7A1P24310 79 aa18.36■□□□□ 0.53
HMGA2-206ENST00000536545 OR4P4Q8NGL7 312 aa18.36■□□□□ 0.53
HMGA2-206ENST00000536545 VSTM2AQ8TAG5 236 aa18.36■□□□□ 0.53
HMGA2-206ENST00000536545 SSBP3Q9BWW4 388 aaPredicted RBP18.36■□□□□ 0.53
HMGA2-206ENST00000536545 SLC35B3Q9H1N7 401 aa18.36■□□□□ 0.53
HMGA2-206ENST00000536545 BUB1B-PAK6H3BSN5 160 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 IFNA4P05014 189 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 NPBWR1P48145 328 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 RPL8P62917 257 aaKnown RBP18.35■□□□□ 0.53
HMGA2-206ENST00000536545 ZNF506Q5JVG8 444 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 FFAR4Q5NUL3 377 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 ZNF787Q6DD87 383 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 RPP25LQ8N5L8 163 aaKnown RBP18.35■□□□□ 0.53
HMGA2-206ENST00000536545 ZNF709Q8N972 641 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 FAM74A7A6NL05 159 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 C17orf112F2Z3M2 114 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 NDUFS7O75251 213 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 MPDU1O75352 247 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 MBP02144 154 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 ICAM4Q14773 271 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 BSXQ3C1V8 233 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 FAM74A3Q4VXF1 159 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 LCN15Q6UWW0 184 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 TREML4Q6UXN2 200 aa18.35■□□□□ 0.53
HMGA2-206ENST00000536545 AMMECR1Q9Y4X0 333 aaPredicted RBP18.35■□□□□ 0.53
HMGA2-206ENST00000536545 MAP1LC3B2A6NCE7 125 aa18.34■□□□□ 0.53
HMGA2-206ENST00000536545 OPN1MWP04001 364 aa18.34■□□□□ 0.53
HMGA2-206ENST00000536545 OPN1MW2P0DN77 364 aa18.34■□□□□ 0.53
HMGA2-206ENST00000536545 OPN1MW3P0DN78 364 aa18.34■□□□□ 0.53
HMGA2-206ENST00000536545 GPR6P46095 362 aaPredicted RBP18.34■□□□□ 0.53
HMGA2-206ENST00000536545 HAGHQ16775 308 aa18.34■□□□□ 0.53
HMGA2-206ENST00000536545 MAP1LC3BQ9GZQ8 125 aa18.34■□□□□ 0.53
HMGA2-206ENST00000536545 NDUFA4L2Q9NRX3 87 aa18.34■□□□□ 0.53
HMGA2-206ENST00000536545 SMCO3A2RU48 225 aa18.33■□□□□ 0.53
HMGA2-206ENST00000536545 M0R1W7 72 aa18.33■□□□□ 0.53
HMGA2-206ENST00000536545 EFNA4P52798 201 aa18.33■□□□□ 0.53
HMGA2-206ENST00000536545 LOC105371242A0A075B767 164 aa18.32■□□□□ 0.52
HMGA2-206ENST00000536545 LOC102723971A0A1B0GUV8 181 aa18.32■□□□□ 0.52
HMGA2-206ENST00000536545 INS-IGF2F8WCM5 200 aa18.32■□□□□ 0.52
HMGA2-206ENST00000536545 LY6LH3BQJ8 138 aa18.32■□□□□ 0.52
HMGA2-206ENST00000536545 ARSJQ5FYB0 599 aaPredicted RBP18.32■□□□□ 0.52
HMGA2-206ENST00000536545 PNKDQ8N490 385 aa18.32■□□□□ 0.52
HMGA2-206ENST00000536545 OR1L8Q8NGR8 309 aa18.32■□□□□ 0.52
HMGA2-206ENST00000536545 C1orf159Q96HA4 380 aa18.32■□□□□ 0.52
HMGA2-206ENST00000536545 RITA1Q96K30 269 aa18.32■□□□□ 0.52
HMGA2-206ENST00000536545 COMMD5Q9GZQ3 224 aa18.32■□□□□ 0.52
HMGA2-206ENST00000536545 LSM4Q9Y4Z0 139 aaKnown RBP18.32■□□□□ 0.52
HMGA2-206ENST00000536545 IGHV3-72A0A0B4J1Y9 119 aa18.32■□□□□ 0.52
HMGA2-206ENST00000536545 IGHV1-3A0A0C4DH29 117 aa18.32■□□□□ 0.52
HMGA2-206ENST00000536545 FGF8P55075 233 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms