RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 IGHV3-23P01764 117 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 CD3DP04234 171 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 CRYGCP07315 174 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 ZP3P21754 424 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 PSMB6P28072 239 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 EXOSC2Q13868 293 aaKnown RBP10.91□□□□□ -0.66
UBE3B-206ENST00000536398 VAX1Q5SQQ9 334 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 C11orf87Q6NUJ2 197 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 FAM223AQ8IWN6 122 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 CMTM1Q8IZ96 169 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 OR4D10Q8NGI6 311 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 DYNC2LI1Q8TCX1 351 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 BORCS5Q969J3 196 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 RSRP1Q9BUV0 290 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 MTFP1Q9UDX5 166 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 ZNF257Q9Y2Q1 563 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 NSG2Q9Y328 171 aa10.91□□□□□ -0.66
UBE3B-206ENST00000536398 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.9□□□□□ -0.66
UBE3B-206ENST00000536398 BMPR1BO00238 502 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 KRASP01116 189 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 CTRB1P17538 263 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 PI3P19957 117 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 G6PCP35575 357 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 RPL5P46777 297 aaKnown RBP10.9□□□□□ -0.66
UBE3B-206ENST00000536398 TMBIM6P55061 237 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 C15orf32Q32M92 178 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 CTRB2Q6GPI1 263 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 TBC1D26Q86UD7 250 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 SLC25A42Q86VD7 318 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 NECAP1Q8NC96 275 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 OR10W1Q8NGF6 305 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 RAB2BQ8WUD1 216 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 OR4C12Q96R67 309 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 B9D2Q9BPU9 175 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 AIFM2Q9BRQ8 373 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 COMMD9Q9P000 198 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 FBXL7Q9UJT9 491 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 DMRT1Q9Y5R6 373 aa10.9□□□□□ -0.66
UBE3B-206ENST00000536398 IGLC7A0M8Q6 106 aa10.89□□□□□ -0.67
UBE3B-206ENST00000536398 DBX1A6NMT0 343 aa10.89□□□□□ -0.67
UBE3B-206ENST00000536398 MARCH11A6NNE9 402 aa10.89□□□□□ -0.67
UBE3B-206ENST00000536398 PPP5D1E7EU14 171 aa10.89□□□□□ -0.67
UBE3B-206ENST00000536398 H3BMQ9 156 aa10.89□□□□□ -0.67
UBE3B-206ENST00000536398 HLA-AP01891 365 aaKnown RBP10.89□□□□□ -0.67
UBE3B-206ENST00000536398 UCP3P55916 312 aa10.89□□□□□ -0.67
UBE3B-206ENST00000536398 CD69Q07108 199 aa10.89□□□□□ -0.67
UBE3B-206ENST00000536398 RPEL1Q2QD12 228 aa10.89□□□□□ -0.67
UBE3B-206ENST00000536398 OR9G4Q8NGQ1 327 aa10.89□□□□□ -0.67
UBE3B-206ENST00000536398 ELOVL1Q9BW60 279 aa10.89□□□□□ -0.67
UBE3B-206ENST00000536398 TEX50A0A1B0GTY4 177 aa10.88□□□□□ -0.67
UBE3B-206ENST00000536398 IGKV1-39P01597 117 aa10.88□□□□□ -0.67
UBE3B-206ENST00000536398 IGKV1D-39P04432 117 aa10.88□□□□□ -0.67
UBE3B-206ENST00000536398 IFNA6P05013 189 aa10.88□□□□□ -0.67
UBE3B-206ENST00000536398 GP9P14770 177 aa10.88□□□□□ -0.67
UBE3B-206ENST00000536398 ERVK-16P61578 105 aa10.88□□□□□ -0.67
UBE3B-206ENST00000536398 COL7A1Q02388 2944 aa10.88□□□□□ -0.67
UBE3B-206ENST00000536398 RNASE10Q5GAN6 216 aaKnown RBP10.88□□□□□ -0.67
UBE3B-206ENST00000536398 LPCAT3Q6P1A2 487 aa10.88□□□□□ -0.67
UBE3B-206ENST00000536398 LHFPL1Q86WI0 220 aa10.88□□□□□ -0.67
UBE3B-206ENST00000536398 SLC38A6Q8IZM9 456 aa10.88□□□□□ -0.67
UBE3B-206ENST00000536398 TMEM229BQ8NBD8 167 aa10.88□□□□□ -0.67
UBE3B-206ENST00000536398 ISOC1Q96CN7 298 aa10.88□□□□□ -0.67
UBE3B-206ENST00000536398 COMMD5Q9GZQ3 224 aa10.88□□□□□ -0.67
UBE3B-206ENST00000536398 CCDC59Q9P031 241 aaKnown RBP10.88□□□□□ -0.67
UBE3B-206ENST00000536398 SORL1Q92673 2214 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 IGLV11-55A0A075B6I3 123 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 GABARAPH6UMI1 98 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 TPPPO94811 219 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 IGLV1-51P01701 117 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 CD74P04233 296 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 CSN3P07498 182 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 PGAM2P15259 253 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 EDN2P20800 178 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 WT1-ASQ06250 92 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 KLK9Q2XQG4 91 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 FAAP20Q6NZ36 180 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 OR6Q1Q8NGQ2 317 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 DIRAS2Q96HU8 199 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 CCDC140Q96MF4 163 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 ASCL2Q99929 193 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 BCL7BQ9BQE9 202 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 QTRT1Q9BXR0 403 aaKnown RBP10.87□□□□□ -0.67
UBE3B-206ENST00000536398 KLK9Q9UKQ9 250 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 OR51B2Q9Y5P1 312 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 CEPT1Q9Y6K0 416 aa10.87□□□□□ -0.67
UBE3B-206ENST00000536398 HUWE1Q7Z6Z7 4374 aaKnown RBP10.86□□□□□ -0.67
UBE3B-206ENST00000536398 MFSD2BA6NFX1 497 aa10.86□□□□□ -0.67
UBE3B-206ENST00000536398 OR2C1O95371 312 aa10.86□□□□□ -0.67
UBE3B-206ENST00000536398 DEFA4P12838 97 aa10.86□□□□□ -0.67
UBE3B-206ENST00000536398 PPP5CP53041 499 aa10.86□□□□□ -0.67
UBE3B-206ENST00000536398 CLEC19AQ6UXS0 136 aa10.86□□□□□ -0.67
UBE3B-206ENST00000536398 ADAMTSL5Q6ZMM2 481 aa10.86□□□□□ -0.67
UBE3B-206ENST00000536398 MRGPRFQ96AM1 343 aa10.86□□□□□ -0.67
UBE3B-206ENST00000536398 HINT2Q9BX68 163 aa10.86□□□□□ -0.67
UBE3B-206ENST00000536398 SLIRPQ9GZT3 109 aaKnown RBP10.86□□□□□ -0.67
UBE3B-206ENST00000536398 C6orf62Q9GZU0 229 aaPredicted RBP10.86□□□□□ -0.67
UBE3B-206ENST00000536398 NDUFA4L2Q9NRX3 87 aa10.86□□□□□ -0.67
UBE3B-206ENST00000536398 IZUMO1RA6ND01 250 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 RAB3DO95716 219 aa10.85□□□□□ -0.67
UBE3B-206ENST00000536398 TRAPPC2P0DI81 140 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms