RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 FN1P02751 2386 aaKnown RBP9.14□□□□□ -0.95
CDCA3-206ENST00000536241 DNAJC9-AS1A6NH13 148 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 LINC01548A6NM66 108 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 C15orf61A6NNL5 157 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 FGF16O43320 207 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 CNIH1O95406 144 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 SCGB1D2O95969 90 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 IFNA17P01571 189 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 TRAPPC2P0DI81 140 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 TRAPPC2BP0DI82 140 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 HSPE1P61604 102 aaKnown RBP9.14□□□□□ -0.95
CDCA3-206ENST00000536241 CX3CL1P78423 397 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 CYCSP99999 105 aaKnown RBP9.14□□□□□ -0.95
CDCA3-206ENST00000536241 ID3Q02535 119 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 SRSF4Q08170 494 aaKnown RBP9.14□□□□□ -0.95
CDCA3-206ENST00000536241 SPINK9Q5DT21 86 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 C10orf55Q5SWW7 151 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 Q6ZS46 218 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 C16orf82Q7Z2V1 217 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 ZNF429Q86V71 674 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 TMEM86BQ8N661 226 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 NMES1Q9C002 83 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 COMMD5Q9GZQ3 224 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 RANGRFQ9HD47 186 aaPredicted RBP9.14□□□□□ -0.95
CDCA3-206ENST00000536241 FKBP11Q9NYL4 201 aa9.14□□□□□ -0.95
CDCA3-206ENST00000536241 FOXA2Q9Y261 457 aaPredicted RBP9.14□□□□□ -0.95
CDCA3-206ENST00000536241 ZFHX3Q15911 3703 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 IGHV7-81A0A0B4J1V7 117 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 M0QZK8 103 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 CCNKO75909 580 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 ACTL6BO94805 426 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 MBPP02686 304 aaPredicted RBP9.13□□□□□ -0.95
CDCA3-206ENST00000536241 MAS1LP35410 378 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 NKX2-1P43699 371 aaPredicted RBP9.13□□□□□ -0.95
CDCA3-206ENST00000536241 SSBP2P81877 361 aaPredicted RBP9.13□□□□□ -0.95
CDCA3-206ENST00000536241 FXYD3Q14802 87 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 LRRC37A5PQ49AS3 106 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 Q5BKY6 102 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 C9orf152Q5JTZ5 239 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 ZNF562Q6V9R5 426 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 FOXRED2Q8IWF2 684 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 ST6GAL2Q96JF0 529 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 FYTTD1Q96QD9 318 aaKnown RBP9.13□□□□□ -0.95
CDCA3-206ENST00000536241 HSPB9Q9BQS6 159 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 HINT2Q9BX68 163 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 MAGT1Q9H0U3 335 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 MTORP42345 2549 aa9.13□□□□□ -0.95
CDCA3-206ENST00000536241 MXRA5Q9NR99 2828 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 MSGN1A6NI15 193 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 CGB1A6NKQ9 187 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 GPR137BO60478 399 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 HLA-DRB1P01911 266 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 GIPP09681 153 aaPredicted RBP9.12□□□□□ -0.95
CDCA3-206ENST00000536241 COMPP49747 757 aaPredicted RBP9.12□□□□□ -0.95
CDCA3-206ENST00000536241 HILS1P60008 231 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 SPCS3P61009 180 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 POLR2GP62487 172 aaKnown RBP eCLIP9.12□□□□□ -0.95
CDCA3-206ENST00000536241 TNFRSF9Q07011 255 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 CD300CQ08708 224 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 RAB32Q13637 225 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 AARDQ4LEZ3 155 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 OR1L8Q8NGR8 309 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 OR52E5Q8NH55 327 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 PPP1R1CQ8WVI7 109 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 FAM103A1Q9BTL3 118 aaKnown RBP9.12□□□□□ -0.95
CDCA3-206ENST00000536241 RBKSQ9H477 322 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 NDUFA4L2Q9NRX3 87 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 ZNF257Q9Y2Q1 563 aa9.12□□□□□ -0.95
CDCA3-206ENST00000536241 LSM5Q9Y4Y9 91 aaKnown RBP9.12□□□□□ -0.95
CDCA3-206ENST00000536241 A0A1B0GW64 132 aa9.11□□□□□ -0.95
CDCA3-206ENST00000536241 FAM181BA6NEQ2 426 aa9.11□□□□□ -0.95
CDCA3-206ENST00000536241 CEBPZOSA8MTT3 80 aa9.11□□□□□ -0.95
CDCA3-206ENST00000536241 SMLR1H3BR10 107 aa9.11□□□□□ -0.95
CDCA3-206ENST00000536241 CLDN34H7C241 214 aa9.11□□□□□ -0.95
CDCA3-206ENST00000536241 EGR2P11161 476 aaPredicted RBP9.11□□□□□ -0.95
CDCA3-206ENST00000536241 PSMB6P28072 239 aa9.11□□□□□ -0.95
CDCA3-206ENST00000536241 RPL27AP46776 148 aaKnown RBP9.11□□□□□ -0.95
CDCA3-206ENST00000536241 RAP2BP61225 183 aa9.11□□□□□ -0.95
CDCA3-206ENST00000536241 AKAP14Q86UN6 197 aa9.11□□□□□ -0.95
CDCA3-206ENST00000536241 OR10W1Q8NGF6 305 aa9.11□□□□□ -0.95
CDCA3-206ENST00000536241 OR5B3Q8NH48 314 aa9.11□□□□□ -0.95
CDCA3-206ENST00000536241 SRSF12Q8WXF0 261 aaKnown RBP9.11□□□□□ -0.95
CDCA3-206ENST00000536241 NEURL2Q9BR09 285 aa9.11□□□□□ -0.95
CDCA3-206ENST00000536241 HSPB7Q9UBY9 170 aa9.11□□□□□ -0.95
CDCA3-206ENST00000536241 ANK3Q12955 4377 aaKnown RBP9.11□□□□□ -0.95
CDCA3-206ENST00000536241 FAM90A26D6RGX4 464 aa9.1□□□□□ -0.95
CDCA3-206ENST00000536241 TRIM77I1YAP6 450 aa9.1□□□□□ -0.95
CDCA3-206ENST00000536241 K7EPK0 472 aa9.1□□□□□ -0.95
CDCA3-206ENST00000536241 WRBO00258 174 aa9.1□□□□□ -0.95
CDCA3-206ENST00000536241 SYNGR2O43760 224 aa9.1□□□□□ -0.95
CDCA3-206ENST00000536241 MPC2O95563 127 aa9.1□□□□□ -0.95
CDCA3-206ENST00000536241 FGF2P09038 288 aa9.1□□□□□ -0.95
CDCA3-206ENST00000536241 APELAP0DMC3 54 aa9.1□□□□□ -0.95
CDCA3-206ENST00000536241 S100A10P60903 97 aa9.1□□□□□ -0.95
CDCA3-206ENST00000536241 NDPQ00604 133 aa9.1□□□□□ -0.95
CDCA3-206ENST00000536241 C11orf87Q6NUJ2 197 aa9.1□□□□□ -0.95
CDCA3-206ENST00000536241 OR2T35Q8NGX2 323 aa9.1□□□□□ -0.95
CDCA3-206ENST00000536241 GRPEL2Q8TAA5 225 aa9.1□□□□□ -0.95
CDCA3-206ENST00000536241 TAF15Q92804 592 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDCA3-206ENST00000536241 JMJD8Q96S16 334 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms