RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 SCGNO76038 276 aa9.67□□□□□ -0.86
TNFRSF1A-207ENST00000535958 ELLP55199 621 aaPredicted RBP9.67□□□□□ -0.86
TNFRSF1A-207ENST00000535958 ARPC4P59998 168 aa9.67□□□□□ -0.86
TNFRSF1A-207ENST00000535958 HACD4Q5VWC8 232 aa9.67□□□□□ -0.86
TNFRSF1A-207ENST00000535958 CNIH2Q6PI25 160 aa9.67□□□□□ -0.86
TNFRSF1A-207ENST00000535958 PRSS48Q7RTY5 328 aa9.67□□□□□ -0.86
TNFRSF1A-207ENST00000535958 MFSD4AQ8N468 514 aa9.67□□□□□ -0.86
TNFRSF1A-207ENST00000535958 OR4A5Q8NH83 315 aa9.67□□□□□ -0.86
TNFRSF1A-207ENST00000535958 COMMD5Q9GZQ3 224 aa9.67□□□□□ -0.86
TNFRSF1A-207ENST00000535958 IGKV1D-13A0A0B4J2D9 117 aa9.66□□□□□ -0.86
TNFRSF1A-207ENST00000535958 IGHV3-35A0A0C4DH35 117 aa9.66□□□□□ -0.86
TNFRSF1A-207ENST00000535958 OR4C46A6NHA9 309 aa9.66□□□□□ -0.86
TNFRSF1A-207ENST00000535958 TNFSF12O43508 249 aa9.66□□□□□ -0.86
TNFRSF1A-207ENST00000535958 IGKV1-13P0DP09 117 aa9.66□□□□□ -0.86
TNFRSF1A-207ENST00000535958 CATR1Q13166 79 aa9.66□□□□□ -0.86
TNFRSF1A-207ENST00000535958 UNQ9165/PRO28630Q6UXU0 137 aa9.66□□□□□ -0.86
TNFRSF1A-207ENST00000535958 ZNF367Q7RTV3 350 aa9.66□□□□□ -0.86
TNFRSF1A-207ENST00000535958 NUDCD2Q8WVJ2 157 aa9.66□□□□□ -0.86
TNFRSF1A-207ENST00000535958 SECTM1Q8WVN6 248 aa9.66□□□□□ -0.86
TNFRSF1A-207ENST00000535958 DUSP21Q9H596 190 aa9.66□□□□□ -0.86
TNFRSF1A-207ENST00000535958 C5orf66Q9H5L9 145 aa9.66□□□□□ -0.86
TNFRSF1A-207ENST00000535958 BET1LQ9NYM9 111 aa9.66□□□□□ -0.86
TNFRSF1A-207ENST00000535958 KIR2DL5BA0A0G2JN68 375 aa9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 KIR2DL5BA0A0G2JPC4 375 aa9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 E7EUB6 86 aa9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 TGOLN2O43493 480 aa9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 RPL35AP18077 110 aaKnown RBP9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 ATF4P18848 351 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 TIMM50Q3ZCQ8 353 aa9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 SPAG16Q8N0X2 631 aa9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 KIR2DL5AQ8N109 375 aa9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 KIR2DL5BQ8NHK3 375 aa9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 DAZ1Q9NQZ3 744 aaKnown RBP9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 ANXA10Q9UJ72 324 aa9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 ELF5Q9UKW6 265 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 BLOC1S6Q9UL45 172 aa9.65□□□□□ -0.86
TNFRSF1A-207ENST00000535958 FRAS1Q86XX4 4008 aa9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 TMEM235A6NFC5 223 aa9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 TSPAN4O14817 238 aa9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 IGLV2-14P01704 120 aa9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 C8orf88P0DMB2 117 aa9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 EWSR1Q01844 656 aaKnown RBP eCLIP9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 TBCEQ15813 527 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 THOC7Q6I9Y2 204 aaKnown RBP9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 RPP25LQ8N5L8 163 aaKnown RBP9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 DMBX1Q8NFW5 382 aa9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 ZNF502Q8TBZ5 544 aa9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 PHLDA1Q8WV24 401 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 TMEM190Q8WZ59 177 aa9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 RNF183Q96D59 192 aa9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 GALNT14Q96FL9 552 aa9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 SRSF8Q9BRL6 282 aaKnown RBP9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 C20orf24Q9BUV8 137 aa9.64□□□□□ -0.87
TNFRSF1A-207ENST00000535958 A0A1B0GW64 132 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 SMIM30A4D0T7 59 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 OR2T8A6NH00 312 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 RPA2P15927 270 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 NQO2P16083 231 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 PTBP1P26599 531 aaKnown RBP eCLIP9.63□□□□□ -0.871e-7■■■□□ 14.7
TNFRSF1A-207ENST00000535958 AQP4P55087 323 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 TAS2R31P59538 309 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 OR2B8PP59922 312 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 ERVK-16P61578 105 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 C22orf42Q6IC83 251 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 UBAC2Q8NBM4 344 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 ZBTB34Q8NCN2 500 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 OR13F1Q8NGS4 319 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 VN1R17PQ8TDU5 208 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 BSCL2Q96G97 398 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 QTRT1Q9BXR0 403 aaKnown RBP9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 ZNF436Q9C0F3 470 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 MFFQ9GZY8 342 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 NDUFB11Q9NX14 153 aa9.63□□□□□ -0.87
TNFRSF1A-207ENST00000535958 TRDV1A0A1B0GX56 115 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 SULT1C2O00338 296 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 RBFOX2O43251 390 aaKnown RBP eCLIP9.62□□□□□ -0.872e-7■■■■□ 22.6
TNFRSF1A-207ENST00000535958 DEDDO75618 318 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 HPRT1P00492 218 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 IFNA4P05014 189 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 FCGR2CP31995 323 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 MSMO1Q15800 293 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 KLK9Q2XQG4 91 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 LGALS9CQ6DKI2 356 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 SLC25A24Q6NUK1 477 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 SPSB3Q6PJ21 355 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 HSD17B13Q7Z5P4 300 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 GDPD1Q8N9F7 314 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 OR5B3Q8NH48 314 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 GPHA2Q96T91 129 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 CCL28Q9NRJ3 127 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 TMEM140Q9NV12 185 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 KLK9Q9UKQ9 250 aa9.62□□□□□ -0.87
TNFRSF1A-207ENST00000535958 IGLC7A0M8Q6 106 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 NOTOA8MTQ0 251 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 NDUFA4O00483 81 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 UPK2O00526 184 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 PPYP01298 95 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 TRAPPC2P0DI81 140 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 TRAPPC2BP0DI82 140 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 OR13C7P0DN81 318 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms