RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 FAM96AQ9H5X1 160 aa1.65□□□□□ -2.15
VBP1-203ENST00000535916 PARVBQ9HBI1 364 aa1.65□□□□□ -2.15
VBP1-203ENST00000535916 UQCC1Q9NVA1 299 aa1.65□□□□□ -2.15
VBP1-203ENST00000535916 FBXL12Q9NXK8 326 aa1.65□□□□□ -2.15
VBP1-203ENST00000535916 PYCARDQ9ULZ3 195 aa1.65□□□□□ -2.15
VBP1-203ENST00000535916 TMEM56-RWDD3S4R434 201 aa1.65□□□□□ -2.15
VBP1-203ENST00000535916 SPATA31E1Q6ZUB1 1445 aa1.65□□□□□ -2.15
VBP1-203ENST00000535916 MIA2Q96PC5 1412 aa1.65□□□□□ -2.15
VBP1-203ENST00000535916 CHD5Q8TDI0 1954 aa1.65□□□□□ -2.15
VBP1-203ENST00000535916 BAZ2AQ9UIF9 1905 aaKnown RBP1.64□□□□□ -2.15
VBP1-203ENST00000535916 TRPM3Q9HCF6 1732 aaPredicted RBP1.64□□□□□ -2.15
VBP1-203ENST00000535916 IGKV1D-43A0A0B4J1Z2 117 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 A0A1B0GW54 56 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 DHRS12A0PJE2 317 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 C19orf71A6NCJ1 209 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 OR11H12B2RN74 326 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 SULT1A3P0DMM9 295 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 SULT1A4P0DMN0 295 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 CRHBPP24387 322 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 SERPINB1P30740 379 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 RBM11P57052 281 aaKnown RBP1.64□□□□□ -2.15
VBP1-203ENST00000535916 DEFA1P59665 94 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 TFAMQ00059 246 aaKnown RBP1.64□□□□□ -2.15
VBP1-203ENST00000535916 ALX1Q15699 326 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 GRK1Q15835 563 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 ARHGAP11BQ3KRB8 267 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 C3orf33Q6P1S2 294 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 WDR59Q6PJI9 974 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 RASL11AQ6T310 242 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 SPINT4Q6UDR6 99 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 AMTNQ6UX39 209 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 GOLT1AQ6ZVE7 132 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 SSX8Q7RTT4 187 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 TBC1D19Q8N5T2 526 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 OR11H2Q8NH07 326 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 RPS4Y2Q8TD47 263 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 C12orf43Q96C57 262 aaKnown RBP1.64□□□□□ -2.15
VBP1-203ENST00000535916 GPR146Q96CH1 333 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 NMNAT3Q96T66 252 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 C20orf27Q9GZN8 174 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 WDR61Q9GZS3 305 aaKnown RBP1.64□□□□□ -2.15
VBP1-203ENST00000535916 MIXL1Q9H2W2 232 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 CISHQ9NSE2 258 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 TP73-AS1Q9UF72 201 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 UFC1Q9Y3C8 167 aa1.64□□□□□ -2.15
VBP1-203ENST00000535916 LOC105371267A0A1B0GV96 52 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 TRAPPC13A5PLN9 417 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 C17orf98A8MV24 154 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 GGTLC3B5MD39 225 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 PPP5D1E7EU14 171 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 PIRO00625 290 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 MFSD11O43934 449 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 LY6HO94772 140 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 CRYZL1O95825 349 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 IGKV1-5P01602 117 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 C8GP07360 202 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 SRP19P09132 144 aaKnown RBP1.63□□□□□ -2.15
VBP1-203ENST00000535916 SMIM10L2AP0DMW4 78 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 SMIM10L2BP0DMW5 78 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 SLC25A16P16260 332 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 RPL27AP46776 148 aaKnown RBP1.63□□□□□ -2.15
VBP1-203ENST00000535916 GABRA2P47869 451 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 GABRA4P48169 554 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 SERPINB10P48595 397 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 IBA57Q5T440 356 aaKnown RBP1.63□□□□□ -2.15
VBP1-203ENST00000535916 ZNF660Q6AZW8 331 aaPredicted RBP1.63□□□□□ -2.15
VBP1-203ENST00000535916 PACRGLQ8N7B6 248 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 CNEP1R1Q8N9A8 125 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 OR10A6Q8NH74 314 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 CLDND2Q8NHS1 167 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 GNPDA2Q8TDQ7 276 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 RASSF5Q8WWW0 418 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 IGF2BP2-AS1Q96M15 143 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 KLF6Q99612 283 aaPredicted RBP1.63□□□□□ -2.15
VBP1-203ENST00000535916 MND1Q9BWT6 205 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 COMMD5Q9GZQ3 224 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 C11orf68Q9H3H3 251 aaKnown RBP1.63□□□□□ -2.15
VBP1-203ENST00000535916 SMDT1Q9H4I9 107 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 BIN3Q9NQY0 253 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 SS18L2Q9UHA2 77 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 SLC35A3Q9Y2D2 325 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 UTP11Q9Y3A2 253 aaKnown RBP1.63□□□□□ -2.15
VBP1-203ENST00000535916 ZNF407Q9C0G0 2248 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 TRIP11Q15643 1979 aa1.63□□□□□ -2.15
VBP1-203ENST00000535916 ZCCHC11Q5TAX3 1644 aaKnown RBP1.62□□□□□ -2.15
VBP1-203ENST00000535916 SVILO95425 2214 aa1.62□□□□□ -2.15
VBP1-203ENST00000535916 TRBV20OR9-2A0A075B6H5 130 aa1.62□□□□□ -2.15
VBP1-203ENST00000535916 hCG_1818297A0A087WSY0 165 aa1.62□□□□□ -2.15
VBP1-203ENST00000535916 TRAV4A0A0B4J268 109 aa1.62□□□□□ -2.15
VBP1-203ENST00000535916 DPRXA6NFQ7 191 aa1.62□□□□□ -2.15
VBP1-203ENST00000535916 SIGLEC16A6NMB1 481 aa1.62□□□□□ -2.15
VBP1-203ENST00000535916 A8MT66 165 aa1.62□□□□□ -2.15
VBP1-203ENST00000535916 GPR31O00270 319 aa1.62□□□□□ -2.15
VBP1-203ENST00000535916 HMGB3O15347 200 aaKnown RBP1.62□□□□□ -2.15
VBP1-203ENST00000535916 NBEAP1P0C6P0 100 aa1.62□□□□□ -2.15
VBP1-203ENST00000535916 CPMP14384 443 aa1.62□□□□□ -2.15
VBP1-203ENST00000535916 ZNF22P17026 224 aaPredicted RBP1.62□□□□□ -2.15
VBP1-203ENST00000535916 G6PCP35575 357 aa1.62□□□□□ -2.15
VBP1-203ENST00000535916 BIKQ13323 160 aa1.62□□□□□ -2.15
VBP1-203ENST00000535916 TSNQ15631 228 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms