RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TGOLN2O43493 480 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 FABP1P07148 127 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 OR52E5Q8NH55 327 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 ZCCHC14Q8WYQ9 949 aaKnown RBP10.97□□□□□ -0.65
VPS33B-202ENST00000535906 RNASE6Q93091 150 aaKnown RBP10.97□□□□□ -0.65
VPS33B-202ENST00000535906 RAB24Q969Q5 203 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 RHOVQ96L33 236 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 LINC00312Q9Y6C7 94 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 TRBV24-1A0A075B6N3 115 aa10.96□□□□□ -0.65
VPS33B-202ENST00000535906 NKX6-3A6NJ46 265 aa10.96□□□□□ -0.65
VPS33B-202ENST00000535906 RRHO14718 337 aa10.96□□□□□ -0.65
VPS33B-202ENST00000535906 IFNA10P01566 189 aa10.96□□□□□ -0.65
VPS33B-202ENST00000535906 VDAC2P45880 294 aaPredicted RBP10.96□□□□□ -0.65
VPS33B-202ENST00000535906 THBS3P49746 956 aa10.96□□□□□ -0.65
VPS33B-202ENST00000535906 TMPRSS3P57727 454 aa10.96□□□□□ -0.65
VPS33B-202ENST00000535906 TMEM241Q24JQ0 296 aa10.96□□□□□ -0.65
VPS33B-202ENST00000535906 PDLIM3Q53GG5 364 aaPredicted RBP10.96□□□□□ -0.65
VPS33B-202ENST00000535906 SLC25A48Q6ZT89 311 aaKnown RBP10.96□□□□□ -0.65
VPS33B-202ENST00000535906 HEYLQ9NQ87 328 aaPredicted RBP10.96□□□□□ -0.65
VPS33B-202ENST00000535906 GSN-AS1Q9NRJ2 163 aa10.96□□□□□ -0.65
VPS33B-202ENST00000535906 PPIAL4EA0A075B759 164 aa10.96□□□□□ -0.66
VPS33B-202ENST00000535906 PPIAL4DF5H284 164 aa10.96□□□□□ -0.66
VPS33B-202ENST00000535906 PPIAL4FP0DN26 164 aa10.96□□□□□ -0.66
VPS33B-202ENST00000535906 RPL31P62899 125 aaKnown RBP10.96□□□□□ -0.66
VPS33B-202ENST00000535906 OR4A47Q6IF82 309 aa10.96□□□□□ -0.66
VPS33B-202ENST00000535906 SSX3Q99909 188 aa10.96□□□□□ -0.66
VPS33B-202ENST00000535906 OR51M1Q9H341 326 aa10.96□□□□□ -0.66
VPS33B-202ENST00000535906 NGBQ9NPG2 151 aa10.96□□□□□ -0.66
VPS33B-202ENST00000535906 RAXQ9Y2V3 346 aa10.96□□□□□ -0.66
VPS33B-202ENST00000535906 PPIAL4AQ9Y536 164 aa10.96□□□□□ -0.66
VPS33B-202ENST00000535906 ARFGEF3Q5TH69 2177 aa10.96□□□□□ -0.66
VPS33B-202ENST00000535906 IFITM10A6NMD0 228 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 GFRA3O60609 400 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 CCL3L1P16619 93 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 NHLH1Q02575 133 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 ADIRFQ15847 76 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 LYPD2Q6UXB3 125 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 ABHD12Q8N2K0 398 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 Q8N7P7 452 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 TMEM170AQ8WVE7 144 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 TMEM106BQ9NUM4 274 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 TCF19Q9Y242 345 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 WDR83OSQ9Y284 106 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 C15orf61A6NNL5 157 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 CT45A6P0DMU7 189 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 CT45A5P0DMU8 189 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 CT45A7P0DMV0 189 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 DEFA4P12838 97 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 CD1BP29016 333 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 RPP30P78346 268 aaKnown RBP10.95□□□□□ -0.66
VPS33B-202ENST00000535906 ACOT6Q3I5F7 207 aaPredicted RBP10.95□□□□□ -0.66
VPS33B-202ENST00000535906 SPNS3Q6ZMD2 512 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 RPUSD4Q96CM3 377 aaKnown RBP10.95□□□□□ -0.66
VPS33B-202ENST00000535906 PARLQ9H300 379 aa10.95□□□□□ -0.66
VPS33B-202ENST00000535906 VSTM5A8MXK1 200 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 TNFRSF13BO14836 293 aaPredicted RBP10.94□□□□□ -0.66
VPS33B-202ENST00000535906 IGKV1-16P04430 117 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 RPL23P62829 140 aaKnown RBP10.94□□□□□ -0.66
VPS33B-202ENST00000535906 BSXQ3C1V8 233 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 TMEM200BQ69YZ2 307 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 OR4F5Q8NH21 305 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 GATAD1Q8WUU5 269 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 ADTRPQ96IZ2 230 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 OR4F4Q96R69 305 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 GAR1Q9NY12 217 aaKnown RBP10.94□□□□□ -0.66
VPS33B-202ENST00000535906 MIOXQ9UGB7 285 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 SPTBN4Q9H254 2564 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 PRSS46E5RG02 174 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 SOX15O60248 233 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 TRGC1P0CF51 173 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 MYOD1P15172 320 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 S100PP25815 95 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 CDC34P49427 236 aaPredicted RBP10.94□□□□□ -0.66
VPS33B-202ENST00000535906 MEF2CQ06413 473 aaPredicted RBP10.94□□□□□ -0.66
VPS33B-202ENST00000535906 TMEM30BQ3MIR4 351 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 ABHD5Q8WTS1 349 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 FRZBQ92765 325 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 GGACTQ9BVM4 153 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 GAL3ST2Q9H3Q3 398 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 DYNLRB1Q9NP97 96 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 TMEM14BQ9NUH8 114 aa10.94□□□□□ -0.66
VPS33B-202ENST00000535906 SEC14L6B5MCN3 397 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 PLAUP00749 431 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 S100A2P29034 98 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 ZNF714Q96N38 554 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 TNCP24821 2201 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 ELOA3CA0A087WX78 387 aaPredicted RBP10.93□□□□□ -0.66
VPS33B-202ENST00000535906 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.93□□□□□ -0.66
VPS33B-202ENST00000535906 SMCO3A2RU48 225 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 SRRM4A7MD48 611 aaKnown RBP10.93□□□□□ -0.66
VPS33B-202ENST00000535906 LINC00587B1AMM8 73 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 PHOX2AO14813 284 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 PAGE4O60829 102 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 MPDU1O75352 247 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 C16orf82Q7Z2V1 217 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 LINC01560Q8TB33 94 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 H1FXQ92522 213 aaKnown RBP10.93□□□□□ -0.66
VPS33B-202ENST00000535906 RAB1CQ92928 201 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 CTSZQ9UBR2 303 aa10.93□□□□□ -0.66
VPS33B-202ENST00000535906 FOXA2Q9Y261 457 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms