RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 HAGHQ16775 308 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 AADACL3Q5VUY0 350 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 CTRB2Q6GPI1 263 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 OR51H1Q8NH63 302 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 CD300LFQ8TDQ1 290 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 ISOC1Q96CN7 298 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 FANCD2OSQ96PS1 177 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 SLC2A8Q9NY64 477 aa12.26□□□□□ -0.45
CLSTN3-204ENST00000535313 C2orf70A6NJV1 201 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 LGALS9O00182 355 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 TPPPO94811 219 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 REG1AP05451 166 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 FOLR2P14207 255 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 MYOD1P15172 320 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 CD81P60033 236 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 NCS1P62166 190 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 LSM3P62310 102 aaKnown RBP12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 DEFB114Q30KQ6 69 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 UBE2NLQ5JXB2 153 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 TMEM69Q5SWH9 247 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 CLEC19AQ6UXS0 136 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 ADAMTSL5Q6ZMM2 481 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 ZNF818PQ6ZRF7 136 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 GPHB5Q86YW7 130 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 DMBX1Q8NFW5 382 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 COMMD5Q9GZQ3 224 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 TECRQ9NZ01 308 aaKnown RBP12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 EHFQ9NZC4 300 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 DMRT1Q9Y5R6 373 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 S4R3C0 116 aa12.25□□□□□ -0.45
CLSTN3-204ENST00000535313 UPK2O00526 184 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 GABARAPO95166 117 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 IFNA6P05013 189 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 OR2B8PP59922 312 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 POU2AF1Q16633 256 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 GUCA2BQ16661 112 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 KLK9Q2XQG4 91 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 FAM106AQ4KMX7 169 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 SAMD12Q8N8I0 201 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 CXorf58Q96LI9 332 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 CCDC140Q96MF4 163 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 NEURL2Q9BR09 285 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 PLEKHA2Q9HB19 425 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 PLEKHA3Q9HB20 300 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 TMEM140Q9NV12 185 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 KLK9Q9UKQ9 250 aa12.24□□□□□ -0.45
CLSTN3-204ENST00000535313 DYNC2H1Q8NCM8 4307 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 IGLV11-55A0A075B6I3 123 aa12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 TRBV7-1A0A0A6YYK4 115 aa12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 ZNF320A2RRD8 509 aa12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 GNRHRP30968 328 aa12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 RPS19P39019 145 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 TAS2R46P59540 309 aa12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 ERVK-16P61578 105 aa12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 GPR107Q5VW38 600 aa12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 SRSF8Q9BRL6 282 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 ZNF2Q9BSG1 426 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 EDA2RQ9HAV5 297 aa12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 COMMD9Q9P000 198 aa12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 THYN1Q9P016 225 aa12.23□□□□□ -0.45
CLSTN3-204ENST00000535313 TRAV3A0A0B4J244 114 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 CGB1A6NKQ9 187 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 ZNF785A8K8V0 405 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 CYB5BO43169 146 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 S1PR2O95136 353 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 PMP2P02689 132 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 CLEC3BP05452 202 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 FGF2P09038 288 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 CBLN1P23435 193 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 RFX2P48378 723 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 TAS2R20P59543 309 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 VBP1P61758 197 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 DHRS11Q6UWP2 260 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 OR5H2Q8NGV7 314 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 MOB3AQ96BX8 217 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 QTRT1Q9BXR0 403 aaKnown RBP12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 ZC4H2Q9NQZ6 224 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 CEPT1Q9Y6K0 416 aa12.22□□□□□ -0.45
CLSTN3-204ENST00000535313 IGLC7A0M8Q6 106 aa12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 MFSD2BA6NFX1 497 aa12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 CD7P09564 240 aa12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 RPA2P15927 270 aa12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 EDN2P20800 178 aa12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 PRSS3P35030 304 aa12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 RPL5P46777 297 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 ZNF57Q68EA5 555 aaPredicted RBP12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 ZFAND6Q6FIF0 208 aa12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 THOC7Q6I9Y2 204 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 GPR141Q7Z602 305 aa12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 CMTM1Q8IZ96 169 aa12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 RBM38Q9H0Z9 239 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 ANAPC10Q9UM13 185 aa12.21□□□□□ -0.45
CLSTN3-204ENST00000535313 TMEM213A2RRL7 107 aa12.2□□□□□ -0.46
CLSTN3-204ENST00000535313 OR11H12B2RN74 326 aa12.2□□□□□ -0.46
CLSTN3-204ENST00000535313 PGLYRP1O75594 196 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-204ENST00000535313 RLN1P04808 185 aa12.2□□□□□ -0.46
CLSTN3-204ENST00000535313 F2RP25116 425 aa12.2□□□□□ -0.46
CLSTN3-204ENST00000535313 SLC16A13Q7RTY0 426 aa12.2□□□□□ -0.46
CLSTN3-204ENST00000535313 HSD17B13Q7Z5P4 300 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-204ENST00000535313 DEFB125Q8N687 156 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms