RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 COL25A1Q9BXS0 654 aaPredicted RBP10.74□□□□□ -0.69
SPG11-203ENST00000535302 A0A1B0GV90 55 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 FAM19A2Q8N3H0 131 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 TAF15Q92804 592 aaKnown RBP eCLIP10.73□□□□□ -0.69
SPG11-203ENST00000535302 FBXL15Q9H469 300 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 RTTNQ86VV8 2226 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 IGHV3-73A0A0B4J1V6 119 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 SEC11BP0C7V7 166 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 C1QTNF9BB2RNN3 333 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 NPIPB8E9PQR5 432 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 RPS11P62280 158 aaKnown RBP eCLIP10.73□□□□□ -0.69
SPG11-203ENST00000535302 EGR4Q05215 589 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 MARCH11A6NNE9 402 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 FOLR2P14207 255 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 GATA2P23769 480 aaPredicted RBP10.73□□□□□ -0.69
SPG11-203ENST00000535302 HBBP68871 147 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 JOSD1Q15040 202 aaPredicted RBP10.73□□□□□ -0.69
SPG11-203ENST00000535302 FAM209BQ5JX69 171 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 AQP3Q92482 292 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 IGKV1D-43A0A0B4J1Z2 117 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 FSTP19883 344 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 PSG9Q00887 426 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 OR51G1Q8NGK1 321 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 OR10AG1Q8NH19 301 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 MBD3L1Q8WWY6 194 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 LOC390937A0A1W2PQ73 354 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 CD33P20138 364 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 STPG3Q8N7X2 389 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 CHRNA10Q9GZZ6 450 aa10.73□□□□□ -0.69
SPG11-203ENST00000535302 LEMD1Q68G75 181 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 UNQ9370/PRO34162Q6UXP9 181 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 PPP1R32Q7Z5V6 425 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 TXNDC17Q9BRA2 123 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 ZNF107Q9UII5 783 aaPredicted RBP10.72□□□□□ -0.69
SPG11-203ENST00000535302 H1FOOQ8IZA3 346 aaPredicted RBP10.72□□□□□ -0.69
SPG11-203ENST00000535302 PPP1R3EQ9H7J1 279 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 GPR132Q9UNW8 380 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 MAP1BP46821 2468 aaKnown RBP10.72□□□□□ -0.69
SPG11-203ENST00000535302 SELENOTP62341 195 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 PMCHL1Q16048 86 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 SLC25A34Q6PIV7 304 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 SPSB2Q99619 263 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 C5orf66Q9H5L9 145 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 THSD7AQ9UPZ6 1657 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 MC5RP33032 325 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 CENPWQ5EE01 88 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 DEFB121Q5J5C9 76 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 C2orf88Q9BSF0 95 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 AGAP20933 346 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 C1QL2Q7Z5L3 287 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 LINC00527Q9UJ94 153 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 CA1P00915 261 aaPredicted RBP10.72□□□□□ -0.69
SPG11-203ENST00000535302 CELA3BP08861 270 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 CDKN1AP38936 164 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 FXYD7P58549 80 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 Q5BKY6 102 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 LOXL4Q96JB6 756 aa10.72□□□□□ -0.69
SPG11-203ENST00000535302 VAX1Q5SQQ9 334 aa10.71□□□□□ -0.69
SPG11-203ENST00000535302 OR5A1Q8NGJ0 315 aa10.71□□□□□ -0.69
SPG11-203ENST00000535302 SCGB3A1Q96QR1 104 aa10.71□□□□□ -0.69
SPG11-203ENST00000535302 LSM4Q9Y4Z0 139 aaKnown RBP10.71□□□□□ -0.69
SPG11-203ENST00000535302 PLSCR2Q9NRY7 297 aa10.71□□□□□ -0.69
SPG11-203ENST00000535302 HLA-DRB1P01911 266 aa10.71□□□□□ -0.69
SPG11-203ENST00000535302 TMEM106BQ9NUM4 274 aa10.71□□□□□ -0.69
SPG11-203ENST00000535302 CGAP01215 116 aa10.71□□□□□ -0.7
SPG11-203ENST00000535302 ABHD17AQ96GS6 310 aa10.71□□□□□ -0.7
SPG11-203ENST00000535302 YLPM1P49750 1951 aaKnown RBP10.71□□□□□ -0.7
SPG11-203ENST00000535302 CACNA1DQ01668 2161 aa10.71□□□□□ -0.7
SPG11-203ENST00000535302 SMIM6P0DI80 62 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 TNFRSF9Q07011 255 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 MMD2Q8IY49 270 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 JMJD8Q96S16 334 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 A0A1W2PR77 199 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 APOHP02749 345 aaPredicted RBP10.7□□□□□ -0.7
SPG11-203ENST00000535302 LINC00614P0C842 121 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 CFAP161Q6P656 301 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 TMEM54Q969K7 222 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 PEX7O00628 323 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 SMIM10L1P0DMW3 83 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 ZCCHC24Q8N2G6 241 aaKnown RBP10.7□□□□□ -0.7
SPG11-203ENST00000535302 SMIM10Q96HG1 83 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 CFHR5Q9BXR6 569 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 COL24A1Q17RW2 1714 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 TGFBR3LH3BV60 316 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 BSPH1Q075Z2 132 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 TFF3Q07654 80 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 FAM216BQ8N7L0 139 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 ZNF837Q96EG3 531 aaPredicted RBP10.7□□□□□ -0.7
SPG11-203ENST00000535302 ASPHD2Q6ICH7 369 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 TMEM45BQ96B21 275 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 MRPS16Q9Y3D3 137 aaKnown RBP10.7□□□□□ -0.7
SPG11-203ENST00000535302 HEATR1Q9H583 2144 aaKnown RBP10.7□□□□□ -0.7
SPG11-203ENST00000535302 A0A1B0GWB2 263 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 EFNB1P98172 346 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 PET117Q6UWS5 81 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 NRIP2Q9BQI9 281 aa10.7□□□□□ -0.7
SPG11-203ENST00000535302 SCO2A0A1W2PP80 73 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 MEF2BQ02080 365 aaPredicted RBP10.69□□□□□ -0.7
SPG11-203ENST00000535302 ZNF345Q14585 488 aa10.69□□□□□ -0.7
SPG11-203ENST00000535302 C1orf122Q6ZSJ8 110 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms