RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 FAM3BP58499 235 aaPredicted RBP5.85□□□□□ -1.47
CLIP1-206ENST00000535290 TPBGQ13641 420 aa5.85□□□□□ -1.47
CLIP1-206ENST00000535290 TMEM41BQ5BJD5 291 aa5.85□□□□□ -1.47
CLIP1-206ENST00000535290 TRPT1Q86TN4 253 aaKnown RBP5.85□□□□□ -1.47
CLIP1-206ENST00000535290 SPATA24Q86W54 205 aa5.85□□□□□ -1.47
CLIP1-206ENST00000535290 TMEM116Q8NCL8 245 aa5.85□□□□□ -1.47
CLIP1-206ENST00000535290 SVIPQ8NHG7 77 aa5.85□□□□□ -1.47
CLIP1-206ENST00000535290 ZNF414Q96IQ9 312 aa5.85□□□□□ -1.47
CLIP1-206ENST00000535290 OR51E2Q9H255 320 aa5.85□□□□□ -1.47
CLIP1-206ENST00000535290 RIMS4Q9H426 269 aaPredicted RBP5.85□□□□□ -1.47
CLIP1-206ENST00000535290 TMEM14BQ9NUH8 114 aa5.85□□□□□ -1.47
CLIP1-206ENST00000535290 CKLFQ9UBR5 152 aa5.85□□□□□ -1.47
CLIP1-206ENST00000535290 AK3Q9UIJ7 227 aa5.85□□□□□ -1.47
CLIP1-206ENST00000535290 TMED3Q9Y3Q3 217 aa5.85□□□□□ -1.47
CLIP1-206ENST00000535290 VPS13BQ7Z7G8 4022 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 TRBV5-7A0A0A0MS05 114 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 KNCNA6PVL3 124 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 C15orf62A8K5M9 175 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 RAB27BO00194 218 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 HTN3P15516 51 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 EMP1P54849 157 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 RPS11P62280 158 aaKnown RBP eCLIP5.84□□□□□ -1.47
CLIP1-206ENST00000535290 RPL22L1Q6P5R6 122 aaKnown RBP5.84□□□□□ -1.47
CLIP1-206ENST00000535290 TMEM88Q6PEY1 159 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 ZNF66Q6ZN08 573 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 CDH26Q8IXH8 852 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 TRUB1Q8WWH5 349 aaKnown RBP5.84□□□□□ -1.47
CLIP1-206ENST00000535290 C17orf77Q96MU5 243 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 DCUN1D5Q9BTE7 237 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 SSBP4Q9BWG4 385 aaPredicted RBP5.84□□□□□ -1.47
CLIP1-206ENST00000535290 GABARAPL3Q9BY60 117 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 FAM107BQ9H098 131 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 KCNK15Q9H427 330 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 AMBNQ9NP70 447 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 PLEKHJ1Q9NW61 149 aa5.84□□□□□ -1.47
CLIP1-206ENST00000535290 A0A0A6YYD4 124 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 IGHV3-21A0A0B4J1V1 117 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 TCRBV3S1A0A5B6 114 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 FCGR3BO75015 233 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 DFFBO76075 338 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 KBTBD11O94819 623 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 LIMS3P0CW19 117 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 LIMS4P0CW20 117 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 SPART-AS1P0CW21 52 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 SPP1P10451 314 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 RPL11P62913 178 aaKnown RBP5.83□□□□□ -1.48
CLIP1-206ENST00000535290 DLK1P80370 383 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 PLA2G7Q13093 441 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 ODF1Q14990 250 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 Q499Y3 187 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 CCDC58Q4VC31 144 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 IGSF11Q5DX21 431 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 OR2B11Q5JQS5 317 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 MEDAGQ5VYS4 303 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 TCF24Q7RTU0 167 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 SYT8Q8NBV8 401 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 TMEM167AQ8TBQ9 72 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 VN1R17PQ8TDU5 208 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 GGHQ92820 318 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 BSCL2Q96G97 398 aaPredicted RBP5.83□□□□□ -1.48
CLIP1-206ENST00000535290 ADTRPQ96IZ2 230 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 CMTM3Q96MX0 182 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 MYCBPQ99417 103 aaPredicted RBP5.83□□□□□ -1.48
CLIP1-206ENST00000535290 ATG101Q9BSB4 218 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 GABARAPL1Q9H0R8 117 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 MS4A6AQ9H2W1 248 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 SMPD3Q9NY59 655 aaPredicted RBP5.83□□□□□ -1.48
CLIP1-206ENST00000535290 MGAT4AQ9UM21 535 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 PLA2G2DQ9UNK4 145 aa5.83□□□□□ -1.48
CLIP1-206ENST00000535290 IGLC7A0M8Q6 106 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 KRTAP29-1A8MX34 341 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-206ENST00000535290 TRDCB7Z8K6 153 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 BET1O15155 118 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 NUPL2O15504 423 aaKnown RBP5.82□□□□□ -1.48
CLIP1-206ENST00000535290 SOCS1O15524 211 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 OGG1O15527 345 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 SRMP19623 302 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 BTF3P20290 206 aaKnown RBP5.82□□□□□ -1.48
CLIP1-206ENST00000535290 MAS1LP35410 378 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 SERPINB10P48595 397 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 SCAND1P57086 179 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 PAFAH1B2P68402 229 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 UNC119Q13432 240 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 ARFRP1Q13795 201 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 C4orf46Q504U0 113 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 SPSB3Q6PJ21 355 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 PUSL1Q8N0Z8 303 aaKnown RBP5.82□□□□□ -1.48
CLIP1-206ENST00000535290 OR52I1Q8NGK6 324 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 SMIM19Q96E16 107 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 UQCC2Q9BRT2 126 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 TM2D1Q9BX74 207 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 TMEM59Q9BXS4 323 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 KRTAP1-5Q9BYS1 174 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 C12orf4Q9NQ89 552 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 GHRLQ9UBU3 117 aa5.82□□□□□ -1.48
CLIP1-206ENST00000535290 TRBV6-7A0A0A0MS04 114 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 H3BS24 57 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 DNASE2O00115 360 aaPredicted RBP5.81□□□□□ -1.48
CLIP1-206ENST00000535290 FABP7O15540 132 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 DCTN3O75935 186 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms