RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 OR1L8Q8NGR8 309 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 OR5B3Q8NH48 314 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 COMMD5Q9GZQ3 224 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 FBXL7Q9UJT9 491 aa7.93□□□□□ -1.14
CSDE1-217ENST00000534699 ELF5Q9UKW6 265 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-217ENST00000534699 OR2B8PP59922 312 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 SLC38A6Q8IZM9 456 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 TMEM56Q96MV1 263 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 TXN2Q99757 166 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 SPATA25Q9BR10 227 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 EHFQ9NZC4 300 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 PIGBOS1A0A0B4J2F0 54 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 INS-IGF2F8WCM5 200 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 BMPR1BO00238 502 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 TRAPPC2P0DI81 140 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 TRAPPC2BP0DI82 140 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 C8orf88P0DMB2 117 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 FCGR2BP31994 310 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-217ENST00000534699 BRWD1-AS2P59051 145 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 FAM110AQ9BQ89 295 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 RSRP1Q9BUV0 290 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 QTRT1Q9BXR0 403 aaKnown RBP7.92□□□□□ -1.14
CSDE1-217ENST00000534699 SLC2A8Q9NY64 477 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 DMRT1Q9Y5R6 373 aa7.92□□□□□ -1.14
CSDE1-217ENST00000534699 ZNF182P17025 639 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-217ENST00000534699 C15orf32Q32M92 178 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 AADACL3Q5VUY0 350 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 ARRDC1Q8N5I2 433 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 SAMD12Q8N8I0 201 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 FANCD2OSQ96PS1 177 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 ZNF436Q9C0F3 470 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-217ENST00000534699 UFC1Q9Y3C8 167 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 K7EMT4 169 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 PGLYRP1O75594 196 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-217ENST00000534699 SNAPC5O75971 98 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 IFNA6P05013 189 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 CD5P06127 495 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 FRMD6-AS1P0C7T7 363 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 MYOD1P15172 320 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 GNRHRP30968 328 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 C11orf87Q6NUJ2 197 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 LSM10Q969L4 123 aaKnown RBP7.91□□□□□ -1.14
CSDE1-217ENST00000534699 DGCR14Q96DF8 476 aaKnown RBP7.91□□□□□ -1.14
CSDE1-217ENST00000534699 CITED4Q96RK1 184 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 HRASLSQ9HDD0 168 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 TAS2R8Q9NYW2 309 aa7.91□□□□□ -1.14
CSDE1-217ENST00000534699 MRPL27Q9P0M9 148 aaKnown RBP7.91□□□□□ -1.14
CSDE1-217ENST00000534699 ANKRD34BA5PLL1 514 aa7.9□□□□□ -1.14
CSDE1-217ENST00000534699 GABARAPO95166 117 aa7.9□□□□□ -1.14
CSDE1-217ENST00000534699 SYNJ2BPP57105 145 aa7.9□□□□□ -1.14
CSDE1-217ENST00000534699 ZNF818PQ6ZRF7 136 aa7.9□□□□□ -1.14
CSDE1-217ENST00000534699 GVQW1Q8N7I0 195 aa7.9□□□□□ -1.14
CSDE1-217ENST00000534699 ZNF114Q8NC26 417 aa7.9□□□□□ -1.14
CSDE1-217ENST00000534699 ZNF2Q9BSG1 426 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-217ENST00000534699 SMIM30A4D0T7 59 aa7.9□□□□□ -1.15
CSDE1-217ENST00000534699 LINC00322Q6ZN03 302 aaPredicted RBP7.9□□□□□ -1.15
CSDE1-217ENST00000534699 ZFAND1Q8TCF1 268 aa7.9□□□□□ -1.15
CSDE1-217ENST00000534699 DYNLRB2Q8TF09 96 aa7.9□□□□□ -1.15
CSDE1-217ENST00000534699 FUNDC2Q9BWH2 189 aa7.9□□□□□ -1.15
CSDE1-217ENST00000534699 MRPS26Q9BYN8 205 aaKnown RBP7.9□□□□□ -1.15
CSDE1-217ENST00000534699 TMEM140Q9NV12 185 aa7.9□□□□□ -1.15
CSDE1-217ENST00000534699 IGLC7A0M8Q6 106 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 ARL3P36405 182 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 DEFB114Q30KQ6 69 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 GDPD1Q8N9F7 314 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 DMBX1Q8NFW5 382 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 ZNF502Q8TBZ5 544 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 BSCL2Q96G97 398 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-217ENST00000534699 RCHY1Q96PM5 261 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 RNF167Q9H6Y7 350 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 NDUFA4L2Q9NRX3 87 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 C2orf70A6NJV1 201 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 OR2J3O76001 311 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 IGHV4-30-4P0DP06 118 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 DEFA4P12838 97 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 BMI1P35226 326 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 FXYD6Q9H0Q3 95 aa7.89□□□□□ -1.15
CSDE1-217ENST00000534699 PRKDCP78527 4128 aaKnown RBP7.89□□□□□ -1.15
CSDE1-217ENST00000534699 SERPINE2P07093 398 aa7.88□□□□□ -1.15
CSDE1-217ENST00000534699 CCDC71LQ8N9Z2 235 aa7.88□□□□□ -1.15
CSDE1-217ENST00000534699 TMEM229BQ8NBD8 167 aa7.88□□□□□ -1.15
CSDE1-217ENST00000534699 MUC7Q8TAX7 377 aa7.88□□□□□ -1.15
CSDE1-217ENST00000534699 F11RQ9Y624 299 aaKnown RBP7.88□□□□□ -1.15
CSDE1-217ENST00000534699 MARCH11A6NNE9 402 aa7.88□□□□□ -1.15
CSDE1-217ENST00000534699 NDUFA4O00483 81 aa7.88□□□□□ -1.15
CSDE1-217ENST00000534699 CTDSPLO15194 276 aa7.88□□□□□ -1.15
CSDE1-217ENST00000534699 HLA-AP01891 365 aaKnown RBP7.88□□□□□ -1.15
CSDE1-217ENST00000534699 ATF4P18848 351 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-217ENST00000534699 LPAR6P43657 344 aa7.88□□□□□ -1.15
CSDE1-217ENST00000534699 SURF2Q15527 256 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-217ENST00000534699 IDO2Q6ZQW0 420 aa7.88□□□□□ -1.15
CSDE1-217ENST00000534699 LYSMD2Q8IV50 215 aa7.88□□□□□ -1.15
CSDE1-217ENST00000534699 TMEM14BQ9NUH8 114 aa7.88□□□□□ -1.15
CSDE1-217ENST00000534699 NOTCH3Q9UM47 2321 aa7.88□□□□□ -1.15
CSDE1-217ENST00000534699 SORL1Q92673 2214 aa7.87□□□□□ -1.15
CSDE1-217ENST00000534699 CGB1A6NKQ9 187 aa7.87□□□□□ -1.15
CSDE1-217ENST00000534699 CORTO00230 105 aa7.87□□□□□ -1.15
CSDE1-217ENST00000534699 SCGB2A1O75556 95 aa7.87□□□□□ -1.15
CSDE1-217ENST00000534699 NDUFB8O95169 186 aa7.87□□□□□ -1.15
CSDE1-217ENST00000534699 FXYD4P59646 89 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms