RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 AGPAT2O15120 278 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 SLC31A1O15431 190 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 TRAF3IP2O43734 574 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-210ENST00000534172 REM1O75628 298 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 MPZL1O95297 269 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 TBX6O95947 436 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-210ENST00000534172 NRASP01111 189 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 PTHP01270 115 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 TRGC2P03986 189 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF705DP0CH99 300 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF705BP0CI00 300 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-210ENST00000534172 ERGP11308 486 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 GABRG2P18507 467 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 HIST1H1TP22492 207 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-210ENST00000534172 IGHV1-2P23083 117 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 GPM6AP51674 278 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 RHOAP61586 193 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 RHOBP62745 196 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 ELOBQ15370 118 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 MMDQ15546 238 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 SSX1Q16384 188 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 HIST3H3Q16695 136 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 TMEM78Q5T7P6 136 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 GLT8D1Q68CQ7 371 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 UNQ5815/PRO19632Q6UWF5 114 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 FAM71E2Q8N5Q1 922 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF439Q8NDP4 499 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 OR6T1Q8NGN1 323 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 OR2T27Q8NH04 317 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 OR13C6PQ8NH95 151 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 KIR2DL5BQ8NHK3 375 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 FRZBQ92765 325 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 DNAJC30Q96LL9 226 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 SCGB3A2Q96PL1 93 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 DOHHQ9BU89 302 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 DERL1Q9BUN8 251 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 PARP11Q9NR21 331 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 DNAJC27Q9NZQ0 273 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 TDRD15B5MCY1 1934 aaKnown RBP2.7□□□□□ -1.98
CSMD3-210ENST00000534172 TICRRQ7Z2Z1 1910 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 PLXND1Q9Y4D7 1925 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 C5orf42Q9H799 3197 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 KIF26BQ2KJY2 2108 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 ZFYVE26Q68DK2 2539 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 A0A087WX48 190 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 KIR2DS1A0A191URI9 304 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 SMIM28A0A1B0GU29 152 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 TMEM189A5PLL7 270 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 B4DEV8 164 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 FTCDNL1E5RQL4 147 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 E7EQ34 232 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 K7EMT4 169 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 HMGB3O15347 200 aaKnown RBP2.7□□□□□ -1.98
CSMD3-210ENST00000534172 ERI3O43414 337 aaKnown RBP2.7□□□□□ -1.98
CSMD3-210ENST00000534172 ENTPD6O75354 484 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 CD8AP01732 235 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 IGHV3-13P01766 116 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 IGLC1P0CG04 106 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 C8orf88P0DMB2 117 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 KIR2DS4P43632 304 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 UBE2NP61088 152 aaKnown RBP2.7□□□□□ -1.98
CSMD3-210ENST00000534172 LMO4P61968 165 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 UNC119Q13432 240 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 C1DQ13901 141 aaKnown RBP2.7□□□□□ -1.98
CSMD3-210ENST00000534172 KIR2DS1Q14954 304 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 PDGFRLQ15198 375 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 VAX1Q5SQQ9 334 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 AGTRAPQ6RW13 159 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 MUC15Q8N387 334 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 OR51A2Q8NGJ7 313 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 OR2AE1Q8NHA4 323 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 APOBEC3DQ96AK3 386 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-210ENST00000534172 SLAMF6Q96DU3 332 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 IP6K3Q96PC2 410 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 PYGO2Q9BRQ0 406 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 EFCAB11Q9BUY7 163 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 BANF2Q9H503 90 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 AIG1Q9NVV5 245 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 NAT8BQ9UHF3 227 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 HS3ST2Q9Y278 367 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 LOXHD1Q8IVV2 1947 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 RALGAPA1Q6GYQ0 2036 aa2.7□□□□□ -1.98
CSMD3-210ENST00000534172 BORCS7-ASMTA0A0B4J1R7 106 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF816-ZNF321PA0A0X1KG74 233 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 FAM159BA6NKW6 160 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 LYRM9A8MSI8 78 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 UMAD1C9J7I0 102 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 SMKR1H3BMG3 65 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 H3BQ15 152 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 GSTZ1O43708 216 aaPredicted RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 RENP00797 406 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 C1QAP02745 245 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 CTSEP14091 401 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 HIST1H1CP16403 213 aaKnown RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 IGFBP3P17936 291 aaPredicted RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 ALOX5APP20292 161 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 PSMB1P20618 241 aaKnown RBP2.69□□□□□ -1.98
CSMD3-210ENST00000534172 CRISP3P54108 245 aa2.69□□□□□ -1.98
CSMD3-210ENST00000534172 MEF2BQ02080 365 aaPredicted RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms