RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 TRIM77I1YAP6 450 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 UPK2O00526 184 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 SHOXO15266 292 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 CHST1O43916 411 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 SSSCA1O60232 199 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 SPDEFO95238 335 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 IGLV2-23P01705 113 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 CD1BP29016 333 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 PAX9P55771 341 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 SPCS3P61009 180 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 UBE2KP61086 200 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 RPL23AP62750 156 aaKnown RBP8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 UBA52P62987 128 aaKnown RBP8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 LDLRAD2Q5SZI1 272 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 SSX9Q7RTT3 188 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 STPG2Q8N412 459 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 TMEM252Q8N6L7 170 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 OR4A16Q8NH70 328 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 MS4A7Q9GZW8 240 aaPredicted RBP8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 MAGT1Q9H0U3 335 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 TMEM14BQ9NUH8 114 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 PRNDQ9UKY0 176 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 ZNF257Q9Y2Q1 563 aa8.09□□□□□ -1.11
LDLRAD3-206ENST00000534091 ATRQ13535 2644 aa8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 KBTBD11O94819 623 aa8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 SCAF4O95104 1147 aaKnown RBP8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 TMEM50AO95807 157 aa8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 SAA1P0DJI8 122 aaPredicted RBP8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 AP2S1P53680 142 aaPredicted RBP8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 EIF5AP63241 154 aaKnown RBP8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 EWSR1Q01844 656 aaKnown RBP eCLIP8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 VMA21Q3ZAQ7 101 aa8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 TEX261Q6UWH6 196 aa8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 RBMS3Q6XE24 437 aaKnown RBP8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 TEX45Q8NA69 505 aa8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 TMEM167AQ8TBQ9 72 aa8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 CFHR4Q92496 578 aa8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 MALSU1Q96EH3 234 aa8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 QTRT1Q9BXR0 403 aaKnown RBP8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 RBKSQ9H477 322 aa8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 CYTL1Q9NRR1 136 aa8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 FKBP11Q9NYL4 201 aa8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 U3KQ87 197 aa8.08□□□□□ -1.12
LDLRAD3-206ENST00000534091 TRAV3A0A0B4J244 114 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 IGSF23A1L1A6 192 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 FAM24AA6NFZ4 105 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 CLDN34H7C241 214 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 IFNA7P01567 189 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 CRYGBP07316 175 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 LGALS4P56470 323 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 HSPE1P61604 102 aaKnown RBP8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 RPS16P62249 146 aaKnown RBP8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 PRB3Q04118 309 aaPredicted RBP8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 EBI3Q14213 229 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 KRTAP24-1Q3LI83 254 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 TMEM14EPQ6UXP3 125 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 MOB3BQ86TA1 216 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 VKORC1L1Q8N0U8 176 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 ZNF680Q8NEM1 530 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 OR5B3Q8NH48 314 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 DTD1Q8TEA8 209 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 ST8SIA2Q92186 375 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 PHYHIPLQ96FC7 376 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 TSNAXQ99598 290 aaKnown RBP8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 PRDM13Q9H4Q3 707 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 FBXL17Q9UF56 701 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 TCF19Q9Y242 345 aa8.07□□□□□ -1.12
LDLRAD3-206ENST00000534091 CENPVL3A0A0U1RRI6 287 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 INS-IGF2F8WCM5 200 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 TIMM23O14925 209 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 KCNAB3O43448 404 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 RBMXL2O75526 392 aaKnown RBP8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 JTBO76095 146 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 NXPH3O95157 252 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 VENTXO95231 258 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 IAPPP10997 89 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 TPT1P13693 172 aaKnown RBP8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 VDAC2P45880 294 aaPredicted RBP8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 COMPP49747 757 aaPredicted RBP8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 SULT1A1P50225 295 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 CAV2P51636 162 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 OR2B8PP59922 312 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 RPL8P62917 257 aaKnown RBP8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 PRCDQ00LT1 54 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 KLF17Q5JT82 389 aaPredicted RBP8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 LHFPL4Q7Z7J7 247 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 STX12Q86Y82 276 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 THNSL2Q86YJ6 484 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 OR8H1Q8NGG4 311 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 AJUBAQ96IF1 538 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 CLCC1Q96S66 551 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 C19orf24Q9BVV8 132 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 ZNF471Q9BX82 626 aaPredicted RBP8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 ZC4H2Q9NQZ6 224 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 PSENENQ9NZ42 101 aa8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 PAIP2BQ9ULR5 123 aaKnown RBP8.06□□□□□ -1.12
LDLRAD3-206ENST00000534091 FBN3Q75N90 2809 aa8.05□□□□□ -1.12
LDLRAD3-206ENST00000534091 IGHV3-72A0A0B4J1Y9 119 aa8.05□□□□□ -1.12
LDLRAD3-206ENST00000534091 CEBPZOSA8MTT3 80 aa8.05□□□□□ -1.12
LDLRAD3-206ENST00000534091 NPFFO15130 113 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms