RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 RDH8Q9NYR8 311 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 V9GYY5 206 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-215ENST00000533818 TCRBV5S2A0A599 114 aa7.27□□□□□ -1.25
CSDE1-215ENST00000533818 F5H768 121 aa7.27□□□□□ -1.25
CSDE1-215ENST00000533818 FAM107AO95990 144 aa7.27□□□□□ -1.25
CSDE1-215ENST00000533818 NAPSAO96009 420 aa7.27□□□□□ -1.25
CSDE1-215ENST00000533818 CD2P06729 351 aa7.27□□□□□ -1.25
CSDE1-215ENST00000533818 ZNF688P0C7X2 276 aa7.27□□□□□ -1.25
CSDE1-215ENST00000533818 MNAT1P51948 309 aa7.27□□□□□ -1.25
CSDE1-215ENST00000533818 MOB1BQ7L9L4 216 aa7.27□□□□□ -1.25
CSDE1-215ENST00000533818 RNF125Q96EQ8 232 aa7.27□□□□□ -1.25
CSDE1-215ENST00000533818 C4orf36Q96KX1 117 aa7.27□□□□□ -1.25
CSDE1-215ENST00000533818 FGFR1OP2Q9NVK5 253 aa7.27□□□□□ -1.25
CSDE1-215ENST00000533818 FAM30AQ9NZY2 134 aa7.27□□□□□ -1.25
CSDE1-215ENST00000533818 HSF4Q9ULV5 492 aa7.27□□□□□ -1.25
CSDE1-215ENST00000533818 YTHDF2Q9Y5A9 579 aaKnown RBP7.27□□□□□ -1.25
CSDE1-215ENST00000533818 EIF4EP06730 217 aaKnown RBP7.26□□□□□ -1.25
CSDE1-215ENST00000533818 FGF9P31371 208 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-215ENST00000533818 ALDH3B2P48448 385 aa7.26□□□□□ -1.25
CSDE1-215ENST00000533818 C6orf201Q7Z4U5 140 aa7.26□□□□□ -1.25
CSDE1-215ENST00000533818 VKORC1L1Q8N0U8 176 aa7.26□□□□□ -1.25
CSDE1-215ENST00000533818 UBAC2Q8NBM4 344 aa7.26□□□□□ -1.25
CSDE1-215ENST00000533818 ST8SIA2Q92186 375 aa7.26□□□□□ -1.25
CSDE1-215ENST00000533818 CMTM5Q96DZ9 223 aa7.26□□□□□ -1.25
CSDE1-215ENST00000533818 C5orf30Q96GV9 206 aa7.26□□□□□ -1.25
CSDE1-215ENST00000533818 ADTRPQ96IZ2 230 aa7.26□□□□□ -1.25
CSDE1-215ENST00000533818 OR10C1Q96KK4 312 aa7.26□□□□□ -1.25
CSDE1-215ENST00000533818 UHRF2Q96PU4 802 aa7.26□□□□□ -1.25
CSDE1-215ENST00000533818 RAB40CQ96S21 281 aa7.26□□□□□ -1.25
CSDE1-215ENST00000533818 RIBC2Q9H4K1 309 aa7.26□□□□□ -1.25
CSDE1-215ENST00000533818 FAM212BQ9NTI7 297 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-215ENST00000533818 LINC00473A8K010 186 aa7.25□□□□□ -1.25
CSDE1-215ENST00000533818 RAB27BO00194 218 aa7.25□□□□□ -1.25
CSDE1-215ENST00000533818 HLA-DRB3P79483 266 aa7.25□□□□□ -1.25
CSDE1-215ENST00000533818 ARFRP1Q13795 201 aa7.25□□□□□ -1.25
CSDE1-215ENST00000533818 C12orf73Q69YU5 71 aa7.25□□□□□ -1.25
CSDE1-215ENST00000533818 AWAT2Q6E213 333 aa7.25□□□□□ -1.25
CSDE1-215ENST00000533818 CBR4Q8N4T8 237 aa7.25□□□□□ -1.25
CSDE1-215ENST00000533818 RNF141Q8WVD5 230 aa7.25□□□□□ -1.25
CSDE1-215ENST00000533818 GRAMD2BQ96HH9 432 aa7.25□□□□□ -1.25
CSDE1-215ENST00000533818 C21orf62Q9NYP8 219 aa7.25□□□□□ -1.25
CSDE1-215ENST00000533818 IGHV3-21A0A0B4J1V1 117 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 IGHV3-66A0A0C4DH42 116 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 IGKV1-6A0A0C4DH72 117 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 LOC102723971A0A1B0GUV8 181 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 K7EQG2 157 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 CYB5BO43169 146 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 KBTBD11O94819 623 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 CTSGP08311 255 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 RAP2AP10114 183 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 DUTP33316 252 aaKnown RBP7.24□□□□□ -1.25
CSDE1-215ENST00000533818 RELQ04864 619 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-215ENST00000533818 TMED1Q13445 227 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 Q56UQ5 140 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 OR2G6Q5TZ20 316 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 CGB2Q6NT52 195 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 JAGN1Q8N5M9 183 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 STXBP6Q8NFX7 210 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 VSTM2AQ8TAG5 236 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 TMEM167AQ8TBQ9 72 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 GPR148Q8TDV2 347 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 DNAJC9Q8WXX5 260 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 RFKQ969G6 155 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 ORAI1Q96D31 301 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 ATP6V0BQ99437 205 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 UPK3BQ9BT76 320 aa7.24□□□□□ -1.25
CSDE1-215ENST00000533818 IGLV5-52A0A0A0MRZ9 124 aa7.23□□□□□ -1.25
CSDE1-215ENST00000533818 CGB1A6NKQ9 187 aa7.23□□□□□ -1.25
CSDE1-215ENST00000533818 E9PI62 339 aa7.23□□□□□ -1.25
CSDE1-215ENST00000533818 FCGR3BO75015 233 aa7.23□□□□□ -1.25
CSDE1-215ENST00000533818 APOHP02749 345 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-215ENST00000533818 CRHBPP24387 322 aa7.23□□□□□ -1.25
CSDE1-215ENST00000533818 SLC25A24Q6NUK1 477 aa7.23□□□□□ -1.25
CSDE1-215ENST00000533818 ATP6V1G3Q96LB4 118 aa7.23□□□□□ -1.25
CSDE1-215ENST00000533818 TM2D1Q9BX74 207 aa7.23□□□□□ -1.25
CSDE1-215ENST00000533818 RIMS4Q9H426 269 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-215ENST00000533818 VSIRQ9H7M9 311 aa7.23□□□□□ -1.25
CSDE1-215ENST00000533818 GHRLQ9UBU3 117 aa7.23□□□□□ -1.25
CSDE1-215ENST00000533818 MGAT4AQ9UM21 535 aa7.23□□□□□ -1.25
CSDE1-215ENST00000533818 TNFRSF18Q9Y5U5 241 aa7.23□□□□□ -1.25
CSDE1-215ENST00000533818 TRBV6-6A0A0A6YYG2 114 aa7.22□□□□□ -1.25
CSDE1-215ENST00000533818 ZAR1LA6NP61 321 aa7.22□□□□□ -1.25
CSDE1-215ENST00000533818 DCTN3O75935 186 aa7.22□□□□□ -1.25
CSDE1-215ENST00000533818 HBE1P02100 147 aa7.22□□□□□ -1.25
CSDE1-215ENST00000533818 KRTAP10-4P60372 401 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-215ENST00000533818 RPL8P62917 257 aaKnown RBP7.22□□□□□ -1.25
CSDE1-215ENST00000533818 ACBD7Q8N6N7 88 aa7.22□□□□□ -1.25
CSDE1-215ENST00000533818 ZNF114Q8NC26 417 aa7.22□□□□□ -1.25
CSDE1-215ENST00000533818 SCARB1Q8WTV0 552 aa7.22□□□□□ -1.25
CSDE1-215ENST00000533818 MRPL48Q96GC5 212 aaKnown RBP7.22□□□□□ -1.25
CSDE1-215ENST00000533818 HDHD3Q9BSH5 251 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-215ENST00000533818 IMPAD1Q9NX62 359 aa7.22□□□□□ -1.25
CSDE1-215ENST00000533818 RBM7Q9Y580 266 aaKnown RBP7.22□□□□□ -1.25
CSDE1-215ENST00000533818 FAT4Q6V0I7 4981 aa7.22□□□□□ -1.25
CSDE1-215ENST00000533818 IGLC7A0M8Q6 106 aa7.21□□□□□ -1.26
CSDE1-215ENST00000533818 J3QRE1 110 aa7.21□□□□□ -1.26
CSDE1-215ENST00000533818 MT1HL1P0DM35 61 aa7.21□□□□□ -1.26
CSDE1-215ENST00000533818 DEFB130BP0DP73 79 aa7.21□□□□□ -1.26
CSDE1-215ENST00000533818 DEFB130AP0DP74 79 aa7.21□□□□□ -1.26
CSDE1-215ENST00000533818 HLA-GP17693 338 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms