RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 VSIG4Q9Y279 399 aa15.49■□□□□ 0.07
CHEK1-215ENST00000533778 TSPAN15O95858 294 aa15.48■□□□□ 0.07
CHEK1-215ENST00000533778 UCP1P25874 307 aa15.48■□□□□ 0.07
CHEK1-215ENST00000533778 SP6Q3SY56 376 aa15.48■□□□□ 0.07
CHEK1-215ENST00000533778 TREML4Q6UXN2 200 aa15.48■□□□□ 0.07
CHEK1-215ENST00000533778 OR5T1Q8NG75 326 aa15.48■□□□□ 0.07
CHEK1-215ENST00000533778 UBE2E2Q96LR5 201 aa15.48■□□□□ 0.07
CHEK1-215ENST00000533778 WDR12Q9GZL7 423 aaKnown RBP15.48■□□□□ 0.07
CHEK1-215ENST00000533778 ZNF355PQ9NSJ1 428 aa15.48■□□□□ 0.07
CHEK1-215ENST00000533778 PRNDQ9UKY0 176 aa15.48■□□□□ 0.07
CHEK1-215ENST00000533778 LINC00854A0A1B0GVQ3 168 aa15.47■□□□□ 0.07
CHEK1-215ENST00000533778 SOX15O60248 233 aa15.47■□□□□ 0.07
CHEK1-215ENST00000533778 BRI3O95415 125 aa15.47■□□□□ 0.07
CHEK1-215ENST00000533778 ZNF846Q147U1 533 aa15.47■□□□□ 0.07
CHEK1-215ENST00000533778 RBMS2Q15434 407 aaKnown RBP15.47■□□□□ 0.07
CHEK1-215ENST00000533778 C10orf55Q5SWW7 151 aa15.47■□□□□ 0.07
CHEK1-215ENST00000533778 KLHL30-AS1Q8NEE0 82 aa15.47■□□□□ 0.07
CHEK1-215ENST00000533778 FAM110DQ8TAY7 271 aaPredicted RBP15.47■□□□□ 0.07
CHEK1-215ENST00000533778 MYOZ3Q8TDC0 251 aa15.47■□□□□ 0.07
CHEK1-215ENST00000533778 SEC22AQ96IW7 307 aa15.47■□□□□ 0.07
CHEK1-215ENST00000533778 FYTTD1Q96QD9 318 aaKnown RBP15.47■□□□□ 0.07
CHEK1-215ENST00000533778 SRSF8Q9BRL6 282 aaKnown RBP15.47■□□□□ 0.07
CHEK1-215ENST00000533778 TMEM222Q9H0R3 208 aa15.47■□□□□ 0.07
CHEK1-215ENST00000533778 KLK15Q9H2R5 256 aa15.47■□□□□ 0.07
CHEK1-215ENST00000533778 TRAV3A0A0B4J244 114 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 PIGBOS1A0A0B4J2F0 54 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 IGKV1-39P01597 117 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 IGKV1D-39P04432 117 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 OR5AC1P0C628 307 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 OR9G9P0C7N8 305 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 ANXA3P12429 323 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 AKR1C4P17516 323 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 ASPHD1Q5U4P2 390 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 THOC7Q6I9Y2 204 aaKnown RBP15.46■□□□□ 0.07
CHEK1-215ENST00000533778 LCNL1Q6ZST4 164 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 TMED4Q7Z7H5 227 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 TTC9CQ8N5M4 171 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 ZNF491Q8N8L2 437 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 OR4A16Q8NH70 328 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 GALNT14Q96FL9 552 aa15.46■□□□□ 0.07
CHEK1-215ENST00000533778 TET2Q6N021 2002 aaPredicted RBP15.45■□□□□ 0.06
CHEK1-215ENST00000533778 CDS2O95674 445 aa15.45■□□□□ 0.06
CHEK1-215ENST00000533778 AKR1C2P52895 323 aa15.45■□□□□ 0.06
CHEK1-215ENST00000533778 TPPP2P59282 170 aa15.45■□□□□ 0.06
CHEK1-215ENST00000533778 OR2B8PP59922 312 aa15.45■□□□□ 0.06
CHEK1-215ENST00000533778 HSD17B13Q7Z5P4 300 aaPredicted RBP15.45■□□□□ 0.06
CHEK1-215ENST00000533778 ADAD2Q8NCV1 583 aaKnown RBP15.45■□□□□ 0.06
CHEK1-215ENST00000533778 OR1L8Q8NGR8 309 aa15.45■□□□□ 0.06
CHEK1-215ENST00000533778 OR5B3Q8NH48 314 aa15.45■□□□□ 0.06
CHEK1-215ENST00000533778 C4orf3Q8WVX3 66 aa15.45■□□□□ 0.06
CHEK1-215ENST00000533778 RRNAD1Q96FB5 475 aaKnown RBP15.45■□□□□ 0.06
CHEK1-215ENST00000533778 MS4A10Q96PG2 267 aa15.45■□□□□ 0.06
CHEK1-215ENST00000533778 COA4Q9NYJ1 87 aa15.45■□□□□ 0.06
CHEK1-215ENST00000533778 OR51B2Q9Y5P1 312 aa15.45■□□□□ 0.06
CHEK1-215ENST00000533778 A0A0G2JLM5 398 aa15.44■□□□□ 0.06
CHEK1-215ENST00000533778 TEX22C9J3V5 150 aa15.44■□□□□ 0.06
CHEK1-215ENST00000533778 DHFRP00374 187 aa15.44■□□□□ 0.06
CHEK1-215ENST00000533778 PF4P02776 101 aa15.44■□□□□ 0.06
CHEK1-215ENST00000533778 TRGV3P03979 118 aa15.44■□□□□ 0.06
CHEK1-215ENST00000533778 APELAP0DMC3 54 aa15.44■□□□□ 0.06
CHEK1-215ENST00000533778 KIAA0141Q14154 515 aaPredicted RBP15.44■□□□□ 0.06
CHEK1-215ENST00000533778 TMEM128Q5BJH2 165 aa15.44■□□□□ 0.06
CHEK1-215ENST00000533778 FAM219AQ8IW50 185 aa15.44■□□□□ 0.06
CHEK1-215ENST00000533778 RNASE11Q8TAA1 199 aaKnown RBP15.44■□□□□ 0.06
CHEK1-215ENST00000533778 GLYATL2Q8WU03 294 aa15.44■□□□□ 0.06
CHEK1-215ENST00000533778 TMEM230Q96A57 120 aa15.44■□□□□ 0.06
CHEK1-215ENST00000533778 QTRT1Q9BXR0 403 aaKnown RBP15.44■□□□□ 0.06
CHEK1-215ENST00000533778 ZNF257Q9Y2Q1 563 aa15.44■□□□□ 0.06
CHEK1-215ENST00000533778 HMX3A6NHT5 357 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 NPIPB5A8MRT5 1133 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 NDUFB6O95139 128 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 TRAPPC2P0DI81 140 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 TRAPPC2BP0DI82 140 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 MYCNOSP40205 109 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 CCR6P51684 374 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 SRPXP78539 464 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 C8orf86Q6ZUL3 223 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 CENPSQ8N2Z9 138 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 RBPMSQ93062 196 aaKnown RBP15.43■□□□□ 0.06
CHEK1-215ENST00000533778 IL22RA2Q969J5 263 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 TMEM56Q96MV1 263 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 NSG2Q9Y328 171 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 TMEM56-RWDD3S4R434 201 aa15.43■□□□□ 0.06
CHEK1-215ENST00000533778 TEX50A0A1B0GTY4 177 aa15.42■□□□□ 0.06
CHEK1-215ENST00000533778 C15orf61A6NNL5 157 aa15.42■□□□□ 0.06
CHEK1-215ENST00000533778 E7EUB6 86 aa15.42■□□□□ 0.06
CHEK1-215ENST00000533778 LYRM1O43325 122 aa15.42■□□□□ 0.06
CHEK1-215ENST00000533778 RBMXL2O75526 392 aaKnown RBP15.42■□□□□ 0.06
CHEK1-215ENST00000533778 IGKV1-5P01602 117 aa15.42■□□□□ 0.06
CHEK1-215ENST00000533778 MYOD1P15172 320 aa15.42■□□□□ 0.06
CHEK1-215ENST00000533778 PSMB6P28072 239 aa15.42■□□□□ 0.06
CHEK1-215ENST00000533778 MRPL41Q8IXM3 137 aaKnown RBP15.42■□□□□ 0.06
CHEK1-215ENST00000533778 CASTOR1Q8WTX7 329 aa15.42■□□□□ 0.06
CHEK1-215ENST00000533778 USMG5Q96IX5 58 aa15.42■□□□□ 0.06
CHEK1-215ENST00000533778 TMEM14BQ9NUH8 114 aa15.42■□□□□ 0.06
CHEK1-215ENST00000533778 C13orf42A0A1B0GVH6 325 aa15.41■□□□□ 0.06
CHEK1-215ENST00000533778 PLA2G10O15496 165 aa15.41■□□□□ 0.06
CHEK1-215ENST00000533778 CRYGCP07315 174 aa15.41■□□□□ 0.06
CHEK1-215ENST00000533778 UBE2MP61081 183 aaKnown RBP15.41■□□□□ 0.06
CHEK1-215ENST00000533778 RUNX1Q01196 453 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms