RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 C5orf17Q8NAS9 161 aa9.52□□□□□ -0.89
AMBRA1-211ENST00000533727 TM2D1Q9BX74 207 aa9.52□□□□□ -0.89
AMBRA1-211ENST00000533727 CXorf1O96002 111 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 COL8A1P27658 744 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 H2BFSP57053 126 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 MEF2BQ02080 365 aaPredicted RBP9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 DMRTA1Q5VZB9 504 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 OR8A1Q8NGG7 326 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 RBM14Q96PK6 669 aaKnown RBP9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 AQP10Q96PS8 301 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 CELA3BP08861 270 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 MFAP2P55001 183 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 HERVK_113P61574 105 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 RPL30P62888 115 aaKnown RBP9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 RUNX1Q01196 453 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 ZNF672Q499Z4 452 aaPredicted RBP9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 FAM216BQ8N7L0 139 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 WBP1Q96G27 269 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 RAX2Q96IS3 184 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 TMEM140Q9NV12 185 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 PI4KAP42356 2102 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 ARHGEF17Q96PE2 2063 aaPredicted RBP9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 GAS1P54826 345 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 C3orf36Q3SXR2 165 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 SAMD13Q5VXD3 122 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 SLC25A33Q9BSK2 321 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 TSC2P49815 1807 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 OOSP1A8MZH6 123 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 S1PR2O95136 353 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 MOSP00540 346 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 MST1P26927 711 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 SLC25A34Q6PIV7 304 aa9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 ZNF430Q9H8G1 570 aaPredicted RBP9.51□□□□□ -0.89
AMBRA1-211ENST00000533727 IGKV1D-43A0A0B4J1Z2 117 aa9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 TDGF1P13385 188 aa9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 ZNF146Q15072 292 aa9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 TMEM252Q8N6L7 170 aa9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 CARHSP1Q9Y2V2 147 aaKnown RBP9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 UQCRFS1P47985 274 aa9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 NPBWR2P48146 333 aa9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 SRSF6Q13247 344 aaKnown RBP9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 OR10J6PQ8NGY7 276 aa9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 SSMEM1Q8WWF3 244 aa9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 CDC42EP3Q9UKI2 254 aa9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 A0A1W2PP11 408 aa9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 PGLYRP1O75594 196 aaPredicted RBP9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 ZNF124Q15973 351 aa9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 GTF3AQ92664 365 aaKnown RBP9.5□□□□□ -0.89
AMBRA1-211ENST00000533727 IGHV1-46P01743 117 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 CLPSP04118 112 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 GATA3P23771 443 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 TSPOP30536 169 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 TXNDC17Q9BRA2 123 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 TMEM204Q9BSN7 226 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 AP5S1Q9NUS5 200 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 IGHV3OR16-10A0A075B7F0 116 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 F5H697 171 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 ZNHIT1O43257 154 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 LMX1BO60663 402 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 CCL1P22362 96 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 NMUP48645 174 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 LRRC75BQ2VPJ9 315 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 TMEM183AQ8IXX5 376 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 ZNF837Q96EG3 531 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 NPDC1Q9NQX5 325 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 NUP210Q8TEM1 1887 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 CKAP5Q14008 2032 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 LYPD3O95274 346 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 HLA-DQA1P01909 254 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 CD1BP29016 333 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 RND3P61587 244 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 WDR25Q64LD2 544 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 SDHCQ99643 169 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 GPR132Q9UNW8 380 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 CEP250Q9BV73 2442 aa9.49□□□□□ -0.89
AMBRA1-211ENST00000533727 TRGV3P03979 118 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 MAS1LP35410 378 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 ARL6IP6Q8N6S5 226 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 ZNF256Q9Y2P7 627 aaPredicted RBP9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 VDAC2P45880 294 aaPredicted RBP9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 B3GALT5-AS1P59052 145 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 CTAG1AP78358 180 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 WFDC3Q8IUB2 231 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 TMEM133Q9H2Q1 129 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 CLEC5AQ9NY25 188 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 PEMTQ9UBM1 199 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 TMEM56-RWDD3S4R434 201 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 MARCH11A6NNE9 402 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 C12orf77C9JDV5 145 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 HKR1P10072 659 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 TM4SF20Q53R12 229 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 LAIR2Q6ISS4 152 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 SLC25A38Q96DW6 304 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 C16orf92Q96LL3 132 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 PLXNA4Q9HCM2 1894 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 PIN1P1O15428 100 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 NDUFB4O95168 129 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 NPPCP23582 126 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 CRYBA2P53672 197 aa9.48□□□□□ -0.89
AMBRA1-211ENST00000533727 RTN4RQ9BZR6 473 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms