RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 PPP1R17O96001 155 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 SELLP14151 372 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 CX3CL1P78423 397 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 PAX2Q02962 417 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 C2orf83Q53S99 150 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 RNFT1Q5M7Z0 435 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 SRSF12Q8WXF0 261 aaKnown RBP5.96□□□□□ -1.46
CTNND1-236ENST00000533667 A0A1W2PRS3 328 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 RBFOX2O43251 390 aaKnown RBP eCLIP5.96□□□□□ -1.464e-7■■■■□ 19.5
CTNND1-236ENST00000533667 IGLV3-19P01714 112 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 HTN1P15515 57 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 TIMM23BQ5SRD1 257 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 EEF1AKMT3Q96AZ1 226 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 NPCDR1Q9BY65 106 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 COL4A5P29400 1685 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 SHISA3A0PJX4 238 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 GDF9O60383 454 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 IGHV2-70P01814 119 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 IGFBP3P17936 291 aaPredicted RBP5.96□□□□□ -1.46
CTNND1-236ENST00000533667 FOXL2P58012 376 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 CIRBPQ14011 172 aaKnown RBP5.96□□□□□ -1.46
CTNND1-236ENST00000533667 ADIPOQQ15848 244 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 C1QTNF5Q9BXJ0 243 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 RPRMQ9NS64 109 aa5.96□□□□□ -1.46
CTNND1-236ENST00000533667 MRPS16Q9Y3D3 137 aaKnown RBP5.96□□□□□ -1.46
CTNND1-236ENST00000533667 CHCHD2Q9Y6H1 151 aaPredicted RBP5.96□□□□□ -1.46
CTNND1-236ENST00000533667 IGHV3-72A0A0B4J1Y9 119 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 NKX2-8O15522 239 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 NPIPB7O75200 414 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 IL6RP08887 468 aaPredicted RBP5.95□□□□□ -1.46
CTNND1-236ENST00000533667 TDGF1P3P51864 188 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 ATP5G2Q06055 141 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 SRSF4Q08170 494 aaKnown RBP5.95□□□□□ -1.46
CTNND1-236ENST00000533667 Q6AWC8 147 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 PPP1R32Q7Z5V6 425 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 CACNG8Q8WXS5 425 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 DDB2Q92466 427 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 YAE1D1Q9NRH1 226 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 PLAUP00749 431 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 MPZP25189 248 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 PMVKQ15126 192 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 CENPWQ5EE01 88 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 ACP7Q6ZNF0 438 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 RAX2Q96IS3 184 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 HIST1H4GQ99525 98 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 IFI27L2Q9H2X8 130 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 IL36BQ9NZH7 164 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 IGHV1-69-2A0A0G2JMI3 117 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 UBE2L6O14933 153 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 LGALS3P17931 250 aaKnown RBP5.95□□□□□ -1.46
CTNND1-236ENST00000533667 NPPCP23582 126 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 CRYBA2P53672 197 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 GFRA1P56159 465 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 CDCP2Q5VXM1 449 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 RTN4RL2Q86UN3 420 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 FADS6Q8N9I5 356 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 TMEM190Q8WZ59 177 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 NPIPB3Q92617 1050 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 ZNF703Q9H7S9 590 aaPredicted RBP5.95□□□□□ -1.46
CTNND1-236ENST00000533667 GEMIN7Q9H840 131 aaKnown RBP5.95□□□□□ -1.46
CTNND1-236ENST00000533667 PARP14Q460N5 1801 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 LOC105371242A0A075B767 164 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 SMIM13P0DJ93 91 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 MEF2CQ06413 473 aaPredicted RBP5.95□□□□□ -1.46
CTNND1-236ENST00000533667 FXYD3Q14802 87 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 OCIAD2Q56VL3 154 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 PNKDQ8N490 385 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 KIR2DL4Q99706 377 aa5.95□□□□□ -1.46
CTNND1-236ENST00000533667 PTPRZ1P23471 2315 aaPredicted RBP5.94□□□□□ -1.46
CTNND1-236ENST00000533667 FOXH1O75593 365 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 CA1P00915 261 aaPredicted RBP5.94□□□□□ -1.46
CTNND1-236ENST00000533667 SRP19P09132 144 aaKnown RBP5.94□□□□□ -1.46
CTNND1-236ENST00000533667 SLAQ13239 276 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 C1QL4Q86Z23 238 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 CLDND2Q8NHS1 167 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 WDYHV1Q96HA8 205 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 SGK494Q96LW2 274 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 RTBDNQ9BSG5 229 aaPredicted RBP5.94□□□□□ -1.46
CTNND1-236ENST00000533667 SPCS1Q9Y6A9 102 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 PTPRFP10586 1907 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 COL11A1P12107 1806 aaPredicted RBP5.94□□□□□ -1.46
CTNND1-236ENST00000533667 ANKRD31Q8N7Z5 1873 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 A0A1B0GTI1 187 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 RRN3P1Q2M238 152 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 TPTE2P1Q5T6R2 138 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 RNASEH2CQ8TDP1 164 aaKnown RBP5.94□□□□□ -1.46
CTNND1-236ENST00000533667 REPIN1Q9BWE0 567 aaKnown RBP5.94□□□□□ -1.46
CTNND1-236ENST00000533667 TNS1Q9HBL0 1735 aaKnown RBP5.94□□□□□ -1.46
CTNND1-236ENST00000533667 SEC16AO15027 2179 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 ZNF646O15015 1829 aaPredicted RBP5.94□□□□□ -1.46
CTNND1-236ENST00000533667 LOC107984156A0A0G2JMH3 177 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 C12orf77C9JDV5 145 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 SPRED2Q7Z698 418 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 ARL17AQ8IVW1 177 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 C5orf30Q96GV9 206 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 GPR82Q96P67 336 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 CTSBP07858 339 aa5.94□□□□□ -1.46
CTNND1-236ENST00000533667 RNF222A6NCQ9 220 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 DPRXA6NFQ7 191 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 CCL1P22362 96 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms