RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 H0YIZ8 118 aa14.78□□□□□ -0.04
PHRF1-205ENST00000533464 TMEM250H0YL14 139 aa14.78□□□□□ -0.04
PHRF1-205ENST00000533464 ATP5IP56385 69 aaPredicted RBP14.78□□□□□ -0.04
PHRF1-205ENST00000533464 PAFAH1B2P68402 229 aa14.78□□□□□ -0.04
PHRF1-205ENST00000533464 TRAV24A0A0B4J272 114 aa14.78□□□□□ -0.04
PHRF1-205ENST00000533464 DIRC3C9JPN6 131 aa14.78□□□□□ -0.04
PHRF1-205ENST00000533464 TM4SF5O14894 197 aa14.78□□□□□ -0.04
PHRF1-205ENST00000533464 HSPB9Q9BQS6 159 aa14.78□□□□□ -0.04
PHRF1-205ENST00000533464 IGKV3D-15A0A087WSY6 115 aa14.78□□□□□ -0.04
PHRF1-205ENST00000533464 ACAA1P09110 424 aaPredicted RBP14.78□□□□□ -0.04
PHRF1-205ENST00000533464 ZCCHC14Q8WYQ9 949 aaKnown RBP14.78□□□□□ -0.04
PHRF1-205ENST00000533464 HSPB8Q9UJY1 196 aa14.78□□□□□ -0.04
PHRF1-205ENST00000533464 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.78□□□□□ -0.04
PHRF1-205ENST00000533464 MOSP00540 346 aa14.78□□□□□ -0.04
PHRF1-205ENST00000533464 IL6RP08887 468 aaPredicted RBP14.78□□□□□ -0.04
PHRF1-205ENST00000533464 METTL26Q96S19 204 aa14.78□□□□□ -0.04
PHRF1-205ENST00000533464 CGB1A6NKQ9 187 aa14.77□□□□□ -0.04
PHRF1-205ENST00000533464 MRPL37Q9BZE1 423 aaKnown RBP14.77□□□□□ -0.04
PHRF1-205ENST00000533464 IGHV3-35A0A0C4DH35 117 aa14.77□□□□□ -0.04
PHRF1-205ENST00000533464 CDK2AP1O14519 115 aa14.77□□□□□ -0.04
PHRF1-205ENST00000533464 PKIAP61925 76 aa14.77□□□□□ -0.04
PHRF1-205ENST00000533464 C16orf92Q96LL3 132 aa14.77□□□□□ -0.04
PHRF1-205ENST00000533464 LOC389332A0A1B0GUA5 103 aa14.77□□□□□ -0.05
PHRF1-205ENST00000533464 BIVMQ86UB2 503 aa14.77□□□□□ -0.05
PHRF1-205ENST00000533464 C17orf100A8MU93 164 aa14.77□□□□□ -0.05
PHRF1-205ENST00000533464 HLA-DQA1P01909 254 aa14.77□□□□□ -0.05
PHRF1-205ENST00000533464 NAT1P18440 290 aa14.77□□□□□ -0.05
PHRF1-205ENST00000533464 ATP5J2P56134 94 aa14.77□□□□□ -0.05
PHRF1-205ENST00000533464 TFF3Q07654 80 aa14.77□□□□□ -0.05
PHRF1-205ENST00000533464 TP53BP1Q12888 1972 aaPredicted RBP14.76□□□□□ -0.05
PHRF1-205ENST00000533464 TFF1P04155 84 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 SCGB1C2P0DMR2 95 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 TFPI2P48307 235 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 CD81P60033 236 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 TMEM177Q53S58 311 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 WDR82Q6UXN9 313 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 GPR61Q9BZJ8 451 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 SEMA5BQ9P283 1151 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 COL4A6Q14031 1691 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 FNDC1Q4ZHG4 1894 aaPredicted RBP14.76□□□□□ -0.05
PHRF1-205ENST00000533464 ID1P41134 155 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 TWIST1Q15672 202 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 EIF4E3Q8N5X7 224 aaKnown RBP14.76□□□□□ -0.05
PHRF1-205ENST00000533464 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.76□□□□□ -0.05
PHRF1-205ENST00000533464 SLC25A33Q9BSK2 321 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 TRAV30A0A087WSZ9 112 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 FAM90A1Q86YD7 464 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 OR1P1Q8NH06 330 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 C18orf12Q96KH6 178 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 COX6B1P14854 86 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 GTF3AQ92664 365 aaKnown RBP14.76□□□□□ -0.05
PHRF1-205ENST00000533464 MRPL18Q9H0U6 180 aaKnown RBP14.76□□□□□ -0.05
PHRF1-205ENST00000533464 CARHSP1Q9Y2V2 147 aaKnown RBP14.76□□□□□ -0.05
PHRF1-205ENST00000533464 MYO7BQ6PIF6 2116 aa14.76□□□□□ -0.05
PHRF1-205ENST00000533464 CSRP1P21291 193 aaKnown RBP14.75□□□□□ -0.05
PHRF1-205ENST00000533464 MPZP25189 248 aa14.75□□□□□ -0.05
PHRF1-205ENST00000533464 DYNLRB2Q8TF09 96 aa14.75□□□□□ -0.05
PHRF1-205ENST00000533464 PLXNA3P51805 1871 aa14.75□□□□□ -0.05
PHRF1-205ENST00000533464 NPIPB11E5RHQ5 1161 aa14.75□□□□□ -0.05
PHRF1-205ENST00000533464 ZCCHC24Q8N2G6 241 aaKnown RBP14.75□□□□□ -0.05
PHRF1-205ENST00000533464 MRPL32Q9BYC8 188 aaKnown RBP14.75□□□□□ -0.05
PHRF1-205ENST00000533464 FBXL15Q9H469 300 aa14.75□□□□□ -0.05
PHRF1-205ENST00000533464 WDR81Q562E7 1941 aa14.75□□□□□ -0.05
PHRF1-205ENST00000533464 Q0VFX4 171 aa14.75□□□□□ -0.05
PHRF1-205ENST00000533464 GTF2H5Q6ZYL4 71 aa14.75□□□□□ -0.05
PHRF1-205ENST00000533464 IFI27L2Q9H2X8 130 aa14.75□□□□□ -0.05
PHRF1-205ENST00000533464 ZNF497Q6ZNH5 498 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 ZNF525Q8N782 197 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 C5orf63A6NC05 138 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 IGFBP2P18065 325 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 KIR2DL2P43627 348 aaPredicted RBP14.74□□□□□ -0.05
PHRF1-205ENST00000533464 KIAA1644Q3SXP7 199 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 PGLYRP4Q96LB8 373 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 LY6EQ16553 131 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 GGACTQ9BVM4 153 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 CHODLQ9H9P2 273 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 IL4P05112 153 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 CCL3L1P16619 93 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 RPL7P18124 248 aaKnown RBP14.74□□□□□ -0.05
PHRF1-205ENST00000533464 SFRP2Q96HF1 295 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 PIMREGQ9BSJ6 248 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 MRPL20Q9BYC9 149 aaKnown RBP14.74□□□□□ -0.05
PHRF1-205ENST00000533464 DPM3Q9P2X0 92 aa14.74□□□□□ -0.05
PHRF1-205ENST00000533464 LDLRAD4O15165 306 aa14.73□□□□□ -0.05
PHRF1-205ENST00000533464 TRGC1P0CF51 173 aa14.73□□□□□ -0.05
PHRF1-205ENST00000533464 MEF2CQ06413 473 aaPredicted RBP14.73□□□□□ -0.05
PHRF1-205ENST00000533464 ATRAIDQ6UW56 229 aa14.73□□□□□ -0.05
PHRF1-205ENST00000533464 CYP2G1PQ6ZSU1 146 aa14.73□□□□□ -0.05
PHRF1-205ENST00000533464 LINC00305Q7Z4B0 112 aa14.73□□□□□ -0.05
PHRF1-205ENST00000533464 IGHV3OR16-10A0A075B7F0 116 aa14.73□□□□□ -0.05
PHRF1-205ENST00000533464 SRP19P09132 144 aaKnown RBP14.73□□□□□ -0.05
PHRF1-205ENST00000533464 ZNF738Q8NE65 137 aa14.73□□□□□ -0.05
PHRF1-205ENST00000533464 LINC00312Q9Y6C7 94 aa14.73□□□□□ -0.05
PHRF1-205ENST00000533464 DIDO1Q9BTC0 2240 aaKnown RBP14.73□□□□□ -0.05
PHRF1-205ENST00000533464 FOXF2Q12947 444 aa14.73□□□□□ -0.05
PHRF1-205ENST00000533464 A0A1W2PS18 150 aa14.73□□□□□ -0.05
PHRF1-205ENST00000533464 CENPWQ5EE01 88 aa14.73□□□□□ -0.05
PHRF1-205ENST00000533464 OR10J6PQ8NGY7 276 aa14.73□□□□□ -0.05
PHRF1-205ENST00000533464 CACNA1BQ00975 2339 aa14.73□□□□□ -0.05
PHRF1-205ENST00000533464 IGKV1-27A0A075B6S5 117 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms