RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 MDFIC2A0A1B0GVS7 189 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 NCBP2LA6PVI3 153 aaKnown RBP11.39□□□□□ -0.59
TRIM3-212ENST00000533064 SRRM4A7MD48 611 aaKnown RBP11.39□□□□□ -0.59
TRIM3-212ENST00000533064 NBR2O15453 112 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 BCL2L11O43521 198 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 SLC25A17O43808 307 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 SPDEFO95238 335 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 SAA1P0DJI8 122 aaPredicted RBP11.39□□□□□ -0.59
TRIM3-212ENST00000533064 SRD5A1P18405 259 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 UBE2KP61086 200 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 ID3Q02535 119 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 OR4A47Q6IF82 309 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 RBMS3Q6XE24 437 aaKnown RBP11.39□□□□□ -0.59
TRIM3-212ENST00000533064 SLC51BQ86UW2 128 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 ZNF680Q8NEM1 530 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 OR4A16Q8NH70 328 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 OR5R1Q8NH85 324 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 BET1LQ9NYM9 111 aa11.39□□□□□ -0.59
TRIM3-212ENST00000533064 KCNAB3O43448 404 aa11.38□□□□□ -0.59
TRIM3-212ENST00000533064 ATP6V1G1O75348 118 aa11.38□□□□□ -0.59
TRIM3-212ENST00000533064 IFNA7P01567 189 aa11.38□□□□□ -0.59
TRIM3-212ENST00000533064 TEX45Q8NA69 505 aa11.38□□□□□ -0.59
TRIM3-212ENST00000533064 OR4A5Q8NH83 315 aa11.38□□□□□ -0.59
TRIM3-212ENST00000533064 RITA1Q96K30 269 aa11.38□□□□□ -0.59
TRIM3-212ENST00000533064 ARPC5LQ9BPX5 153 aa11.38□□□□□ -0.59
TRIM3-212ENST00000533064 COA4Q9NYJ1 87 aa11.38□□□□□ -0.59
TRIM3-212ENST00000533064 METTL1Q9UBP6 276 aaKnown RBP11.38□□□□□ -0.59
TRIM3-212ENST00000533064 CACNG5Q9UF02 275 aa11.38□□□□□ -0.59
TRIM3-212ENST00000533064 RCL1Q9Y2P8 373 aaKnown RBP11.38□□□□□ -0.59
TRIM3-212ENST00000533064 MAST4O15021 2626 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 MSGN1A6NI15 193 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 RRHO14718 337 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 KBTBD11O94819 623 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 IGLV2-23P01705 113 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 P0C879 139 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 HKR1P10072 659 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 CNTFRP26992 372 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 IER3P46695 156 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 P2RY1P47900 373 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 PSG5Q15238 335 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 CXorf66Q5JRM2 361 aaPredicted RBP11.37□□□□□ -0.59
TRIM3-212ENST00000533064 Q6YL49 198 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 Q6ZRM9 215 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 Q71RC1 249 aaPredicted RBP11.37□□□□□ -0.59
TRIM3-212ENST00000533064 PUSL1Q8N0Z8 303 aaKnown RBP11.37□□□□□ -0.59
TRIM3-212ENST00000533064 NPBQ8NG41 125 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 SSMEM1Q8WWF3 244 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 GSX1Q9H4S2 264 aaPredicted RBP11.37□□□□□ -0.59
TRIM3-212ENST00000533064 TCF19Q9Y242 345 aa11.37□□□□□ -0.59
TRIM3-212ENST00000533064 NDUFA3O95167 84 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 PVALBP20472 110 aaPredicted RBP11.36□□□□□ -0.59
TRIM3-212ENST00000533064 RPL12P30050 165 aaKnown RBP11.36□□□□□ -0.59
TRIM3-212ENST00000533064 F2RL1P55085 397 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 EXOSC2Q13868 293 aaKnown RBP11.36□□□□□ -0.59
TRIM3-212ENST00000533064 LY6EQ16553 131 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 IZUMO4Q1ZYL8 232 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 Q8N6K4 173 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 PIFOQ8TCI5 191 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 ZNF48Q96MX3 618 aaPredicted RBP11.36□□□□□ -0.59
TRIM3-212ENST00000533064 RBM14Q96PK6 669 aaKnown RBP11.36□□□□□ -0.59
TRIM3-212ENST00000533064 SLC25A33Q9BSK2 321 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 PRDM13Q9H4Q3 707 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 C11orf1Q9H5F2 150 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.36□□□□□ -0.59
TRIM3-212ENST00000533064 CACFD1Q9UGQ2 172 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 ACTL6BO94805 426 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 CFDP00746 253 aaPredicted RBP11.36□□□□□ -0.59
TRIM3-212ENST00000533064 IGHV4-59P01825 116 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 OR9G9P0C7N8 305 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 POLR2GP62487 172 aaKnown RBP eCLIP11.36□□□□□ -0.59
TRIM3-212ENST00000533064 UBA52P62987 128 aaKnown RBP11.36□□□□□ -0.59
TRIM3-212ENST00000533064 NDUFA5Q16718 116 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 C16orf82Q7Z2V1 217 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 PPP1R27Q86WC6 154 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 TMEM219Q86XT9 240 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 MMD2Q8IY49 270 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 SIGLECL1Q8N7X8 197 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 TMEM167AQ8TBQ9 72 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 FBXL15Q9H469 300 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 FKBP11Q9NYL4 201 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 UBQLN2Q9UHD9 624 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 PRNDQ9UKY0 176 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 SIGLEC9Q9Y336 463 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 MOB4Q9Y3A3 225 aa11.36□□□□□ -0.59
TRIM3-212ENST00000533064 ANK3Q12955 4377 aaKnown RBP11.36□□□□□ -0.59
TRIM3-212ENST00000533064 INAFM1C9JVW0 142 aa11.35□□□□□ -0.59
TRIM3-212ENST00000533064 FAM90A26D6RGX4 464 aa11.35□□□□□ -0.59
TRIM3-212ENST00000533064 WRBO00258 174 aa11.35□□□□□ -0.59
TRIM3-212ENST00000533064 UPK2O00526 184 aa11.35□□□□□ -0.59
TRIM3-212ENST00000533064 RPL8P62917 257 aaKnown RBP11.35□□□□□ -0.59
TRIM3-212ENST00000533064 RELBQ01201 579 aa11.35□□□□□ -0.59
TRIM3-212ENST00000533064 C5orf64Q2M2E5 130 aa11.35□□□□□ -0.59
TRIM3-212ENST00000533064 RASL11BQ9BPW5 248 aa11.35□□□□□ -0.59
TRIM3-212ENST00000533064 ZNF471Q9BX82 626 aaPredicted RBP11.35□□□□□ -0.59
TRIM3-212ENST00000533064 ZC4H2Q9NQZ6 224 aa11.35□□□□□ -0.59
TRIM3-212ENST00000533064 A6NDX4 124 aa11.34□□□□□ -0.59
TRIM3-212ENST00000533064 C15orf61A6NNL5 157 aa11.34□□□□□ -0.59
TRIM3-212ENST00000533064 M0QZK8 103 aa11.34□□□□□ -0.59
TRIM3-212ENST00000533064 TAAR5O14804 337 aa11.34□□□□□ -0.59
TRIM3-212ENST00000533064 SSSCA1O60232 199 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms