RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 FAM90A13PP0C7W8 464 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM90A14PP0C7W9 464 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 FAM90A24PP0C7X0 464 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 HTN3P15516 51 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 HIST1H4AP62805 103 aaKnown RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 SSBP2P81877 361 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-234ENST00000532844 GPR146Q96CH1 333 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 GPHA2Q96T91 129 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 TMEM106BQ9NUM4 274 aa6.95□□□□□ -1.3
CTNND1-234ENST00000532844 EGR4Q05215 589 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 C1orf174Q8IYL3 243 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 OR4A5Q8NH83 315 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 BRWD1Q9NSI6 2320 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 PLXNA1Q9UIW2 1896 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 NKX2-8O15522 239 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 ADRA2AP08913 450 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 FAM106CPP0CH98 169 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 GPR183P32249 361 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 GCSAMQ8N6F7 178 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 SAP25Q8TEE9 199 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 WNT2BQ93097 391 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 HIST1H2BAQ96A08 127 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 EAF1Q96JC9 268 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-234ENST00000532844 GGTLC3B5MD39 225 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 H0YL77 283 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 NPFFO15130 113 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 S1PR2O95136 353 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 FXYD3Q14802 87 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 ZNF56Q15929 161 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 TIMM23BQ5SRD1 257 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 MMD2Q8IY49 270 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 TNFRSF14Q92956 283 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 TMEM54Q969K7 222 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 Q96M66 194 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 C2orf88Q9BSF0 95 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 SH3BGRL3Q9H299 93 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 HS3ST3B1Q9Y662 390 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 KBTBD11-OT1A0A1B0GTJ5 212 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 CEACAM18A8MTB9 384 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 KLF4O43474 513 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 Q5BKY6 102 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 DLL3Q9NYJ7 618 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 PSME4Q14997 1843 aa6.94□□□□□ -1.3
CTNND1-234ENST00000532844 A0A1B0GW15 77 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 GLIPR1P48060 266 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 ITLN1Q8WWA0 313 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 ST6GALNAC6Q969X2 333 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 NXT2Q9NPJ8 142 aaKnown RBP6.93□□□□□ -1.3
CTNND1-234ENST00000532844 HILPDAQ9Y5L2 63 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 ATG2BQ96BY7 2078 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 MPTX1A8MV57 137 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 LCN2P80188 198 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 PCOLCEQ15113 449 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 ATXN8Q156A1 80 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 MRAPQ8TCY5 172 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 MARS2Q96GW9 593 aaKnown RBP6.93□□□□□ -1.3
CTNND1-234ENST00000532844 LOXL4Q96JB6 756 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 TMEM74BQ9NUR3 256 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 NHP2Q9NX24 153 aaKnown RBP6.93□□□□□ -1.3
CTNND1-234ENST00000532844 PILRBQ9UKJ0 227 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 SNRPCP09234 159 aaKnown RBP6.93□□□□□ -1.3
CTNND1-234ENST00000532844 LY6EQ16553 131 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 OR4X2Q8NGF9 303 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 PRDM13Q9H4Q3 707 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 CISD1Q9NZ45 108 aaKnown RBP6.93□□□□□ -1.3
CTNND1-234ENST00000532844 KNTC1P50748 2209 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 PGPEP1LA6NFU8 196 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 TMEM229AB2RXF0 380 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 SSTR5P35346 364 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 FAM106AQ4KMX7 169 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 NDUFAF3Q9BU61 184 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 MS4A6AQ9H2W1 248 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 PRR33A8MZF0 331 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 MPV17P39210 176 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 STARD6P59095 220 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 GAGE13Q4V321 117 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 CDCP2Q5VXM1 449 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 SHISA5Q8N114 240 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 FGFRL1Q8N441 504 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 C18orf15Q96N68 181 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 VGLL1Q99990 258 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 TLNRD1Q9H1K6 362 aa6.93□□□□□ -1.3
CTNND1-234ENST00000532844 PATJQ8NI35 1801 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 IGHV3-72A0A0B4J1Y9 119 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 TMEM187Q14656 261 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 S100A7L2Q5SY68 101 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 ZNF818PQ6ZRF7 136 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 TAF15Q92804 592 aaKnown RBP eCLIP6.92□□□□□ -1.33e-8■■■□□ 14.9
CTNND1-234ENST00000532844 RALGAPA2Q2PPJ7 1873 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 CA7P43166 264 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 NUBP1P53384 320 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 PSG9Q00887 426 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 OCIAD2Q56VL3 154 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 NHLRC3Q5JS37 347 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 SAXO1Q8IYX7 474 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 SCGB3A1Q96QR1 104 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 SHISA3A0PJX4 238 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 TMEM14DPA8MWL7 114 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 P2RY6Q15077 328 aa6.92□□□□□ -1.3
CTNND1-234ENST00000532844 FAM74A4Q5TZK3 123 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms