RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 ICAM4Q14773 271 aa12.35□□□□□ -0.43
SRPRA-206ENST00000532259 C11orf71Q6IPW1 123 aa12.35□□□□□ -0.43
SRPRA-206ENST00000532259 FAM122CQ6P4D5 195 aa12.35□□□□□ -0.43
SRPRA-206ENST00000532259 ZNF429Q86V71 674 aa12.35□□□□□ -0.43
SRPRA-206ENST00000532259 CYB561D1Q8N8Q1 229 aa12.35□□□□□ -0.43
SRPRA-206ENST00000532259 ZNF709Q8N972 641 aa12.35□□□□□ -0.43
SRPRA-206ENST00000532259 CLDND2Q8NHS1 167 aa12.35□□□□□ -0.43
SRPRA-206ENST00000532259 RPS10P5Q9NQ39 176 aa12.35□□□□□ -0.43
SRPRA-206ENST00000532259 KPTNQ9Y664 436 aa12.35□□□□□ -0.43
SRPRA-206ENST00000532259 CELSR1Q9NYQ6 3014 aa12.35□□□□□ -0.43
SRPRA-206ENST00000532259 MAP1LC3B2A6NCE7 125 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 CA2P00918 260 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 SERF2P84101 59 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 ATP6V1FQ16864 119 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 AWAT1Q58HT5 328 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 MAP1LC3BQ9GZQ8 125 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 RAB1BQ9H0U4 201 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 CBLN4Q9NTU7 201 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 SLC39A9Q9NUM3 307 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 ONECUT1Q9UBC0 465 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 ABCA1O95477 2261 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 CSMD2Q7Z408 3487 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 SCAF4O95104 1147 aaKnown RBP12.34□□□□□ -0.43
SRPRA-206ENST00000532259 PPOXP50336 477 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 TMEM30BQ3MIR4 351 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 SOHLH1Q5JUK2 328 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 C10orf55Q5SWW7 151 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 SP5Q6BEB4 398 aaPredicted RBP12.34□□□□□ -0.43
SRPRA-206ENST00000532259 MOB3BQ86TA1 216 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 OR10A7Q8NGE5 316 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 OR10G4Q8NGN3 311 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 OR10G9Q8NGN4 311 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 OR10G7Q8NGN6 311 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 OR52E5Q8NH55 327 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 FLYWCH2Q96CP2 140 aaKnown RBP12.34□□□□□ -0.43
SRPRA-206ENST00000532259 TMEM133Q9H2Q1 129 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 UBTD1Q9HAC8 227 aa12.34□□□□□ -0.43
SRPRA-206ENST00000532259 FOXA2Q9Y261 457 aaPredicted RBP12.34□□□□□ -0.43
SRPRA-206ENST00000532259 PPIAL4CA0A0B4J2A2 164 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 UPK2O00526 184 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 PPIAL4GP0DN37 164 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 TGIF2LXQ8IUE1 241 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 SLC24A4Q8NFF2 622 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 OR9G1Q8NH87 305 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 SSMEM1Q8WWF3 244 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 LHX4Q969G2 390 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 NABP2Q9BQ15 211 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 ZFHX3Q15911 3703 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 E7EUB6 86 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 HBE1P02100 147 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 NPY1RP25929 384 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 DPPA3Q6W0C5 159 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 GATAD1Q8WUU5 269 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 ST6GALNAC6Q969X2 333 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 RAB39BQ96DA2 213 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 PATZ1Q9HBE1 687 aaKnown RBP12.33□□□□□ -0.44
SRPRA-206ENST00000532259 TPSG1Q9NRR2 321 aa12.33□□□□□ -0.44
SRPRA-206ENST00000532259 TEX50A0A1B0GTY4 177 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 KBTBD11O94819 623 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 RPP30P78346 268 aaKnown RBP12.32□□□□□ -0.44
SRPRA-206ENST00000532259 TREML4Q6UXN2 200 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 OR5AN1Q8NGI8 311 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 ISOC2Q96AB3 205 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 PLEKHA3Q9HB20 300 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 SIRT7Q9NRC8 400 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 EPG5Q9HCE0 2579 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 IGHV2-26A0A0B4J1V2 119 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 A0A1W2PRD5 423 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 A0A1W2PRF3 423 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 A0A1W2PRM7 423 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 BTBD17A6NE02 478 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 C22orf46C9J442 243 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 SRP19P09132 144 aaKnown RBP12.32□□□□□ -0.44
SRPRA-206ENST00000532259 APELAP0DMC3 54 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 MLANAQ16655 118 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 C4orf17Q53FE4 359 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 WDR25Q64LD2 544 aaPredicted RBP12.32□□□□□ -0.44
SRPRA-206ENST00000532259 PRNDQ9UKY0 176 aa12.32□□□□□ -0.44
SRPRA-206ENST00000532259 SLC25A17O43808 307 aa12.31□□□□□ -0.44
SRPRA-206ENST00000532259 ARF6P62330 175 aa12.31□□□□□ -0.44
SRPRA-206ENST00000532259 RAB11AP62491 216 aa12.31□□□□□ -0.44
SRPRA-206ENST00000532259 VWC2Q2TAL6 325 aa12.31□□□□□ -0.44
SRPRA-206ENST00000532259 ARSJQ5FYB0 599 aaPredicted RBP12.31□□□□□ -0.44
SRPRA-206ENST00000532259 Q8N7P7 452 aa12.31□□□□□ -0.44
SRPRA-206ENST00000532259 OR8B3Q8NGG8 313 aa12.31□□□□□ -0.44
SRPRA-206ENST00000532259 TMEM186Q96B77 213 aa12.31□□□□□ -0.44
SRPRA-206ENST00000532259 OR8B2Q96RD0 313 aa12.31□□□□□ -0.44
SRPRA-206ENST00000532259 PARD6GQ9BYG4 376 aaPredicted RBP12.31□□□□□ -0.44
SRPRA-206ENST00000532259 LOC105371267A0A1B0GV96 52 aa12.31□□□□□ -0.44
SRPRA-206ENST00000532259 C7orf77A4D0Y5 90 aa12.31□□□□□ -0.44
SRPRA-206ENST00000532259 IL6RP08887 468 aaPredicted RBP12.31□□□□□ -0.44
SRPRA-206ENST00000532259 MIC13Q5XKP0 118 aa12.31□□□□□ -0.44
SRPRA-206ENST00000532259 DHRS7BQ6IAN0 325 aaPredicted RBP12.31□□□□□ -0.44
SRPRA-206ENST00000532259 WDR83OSQ9Y284 106 aa12.31□□□□□ -0.44
SRPRA-206ENST00000532259 CENPEQ02224 2701 aa12.3□□□□□ -0.44
SRPRA-206ENST00000532259 TRBV23-1A0A0A0MS06 115 aa12.3□□□□□ -0.44
SRPRA-206ENST00000532259 PRSS46E5RG02 174 aa12.3□□□□□ -0.44
SRPRA-206ENST00000532259 IGHV3-48P01763 117 aa12.3□□□□□ -0.44
SRPRA-206ENST00000532259 CNTFRP26992 372 aa12.3□□□□□ -0.44
SRPRA-206ENST00000532259 POU2AF1Q16633 256 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 1925.9 ms