RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 FBLL1A6NHQ2 334 aaKnown RBP11.78□□□□□ -0.52
PCF11-204ENST00000530660 SYS1-DBNDD2H3BUS1 97 aa11.78□□□□□ -0.52
PCF11-204ENST00000530660 EN2P19622 333 aaPredicted RBP11.78□□□□□ -0.52
PCF11-204ENST00000530660 HSD52Q0P140 79 aa11.78□□□□□ -0.52
PCF11-204ENST00000530660 SRSF7Q16629 238 aaKnown RBP eCLIP11.78□□□□□ -0.52
PCF11-204ENST00000530660 GDF5OSQ5U4N7 250 aa11.78□□□□□ -0.52
PCF11-204ENST00000530660 KMT2EQ8IZD2 1858 aa11.77□□□□□ -0.52
PCF11-204ENST00000530660 C9orf118A6NHY6 69 aa11.77□□□□□ -0.52
PCF11-204ENST00000530660 FOXH1O75593 365 aa11.77□□□□□ -0.52
PCF11-204ENST00000530660 STAG3L2P0CL84 134 aa11.77□□□□□ -0.52
PCF11-204ENST00000530660 STAG3L3P0CL85 134 aa11.77□□□□□ -0.52
PCF11-204ENST00000530660 SCGB1A1P11684 91 aa11.77□□□□□ -0.52
PCF11-204ENST00000530660 NOGQ13253 232 aa11.77□□□□□ -0.52
PCF11-204ENST00000530660 FAM120AOSQ5T036 256 aa11.77□□□□□ -0.52
PCF11-204ENST00000530660 SPATA31B1PQ5VZV4 182 aa11.77□□□□□ -0.52
PCF11-204ENST00000530660 C2orf91Q6ZV80 131 aa11.77□□□□□ -0.52
PCF11-204ENST00000530660 NABP1Q96AH0 204 aa11.77□□□□□ -0.52
PCF11-204ENST00000530660 ZNF331Q9NQX6 463 aaPredicted RBP11.77□□□□□ -0.52
PCF11-204ENST00000530660 TRANK1O15050 2925 aa11.77□□□□□ -0.53
PCF11-204ENST00000530660 TRAPPC2LH3BP13 241 aa11.77□□□□□ -0.53
PCF11-204ENST00000530660 CDIPTO14735 213 aa11.77□□□□□ -0.53
PCF11-204ENST00000530660 MIC13Q5XKP0 118 aa11.77□□□□□ -0.53
PCF11-204ENST00000530660 OR2Z1Q8NG97 314 aa11.77□□□□□ -0.53
PCF11-204ENST00000530660 OR10AG1Q8NH19 301 aa11.77□□□□□ -0.53
PCF11-204ENST00000530660 ZNF296Q8WUU4 475 aaPredicted RBP11.77□□□□□ -0.53
PCF11-204ENST00000530660 RAB1CQ92928 201 aa11.77□□□□□ -0.53
PCF11-204ENST00000530660 URB1-AS1Q96HZ7 61 aa11.77□□□□□ -0.53
PCF11-204ENST00000530660 PHF7Q9BWX1 381 aaPredicted RBP11.77□□□□□ -0.53
PCF11-204ENST00000530660 MTCH1Q9NZJ7 389 aa11.77□□□□□ -0.53
PCF11-204ENST00000530660 TSSC4Q9Y5U2 329 aaPredicted RBP11.77□□□□□ -0.53
PCF11-204ENST00000530660 C9JCJ5 164 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 OXGR1Q96P68 337 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 JKAMPQ9P055 326 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 SERTM2A0A1B0GWG4 89 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 TNFSF11O14788 317 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 RBMXL2O75526 392 aaKnown RBP11.76□□□□□ -0.53
PCF11-204ENST00000530660 RHBDL1O75783 438 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 CD24P25063 80 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 ZNF816Q0VGE8 651 aaPredicted RBP11.76□□□□□ -0.53
PCF11-204ENST00000530660 VWC2Q2TAL6 325 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 TMEM97Q5BJF2 176 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 NHLRC2Q8NBF2 726 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 KNTC1P50748 2209 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 NBEAQ8NFP9 2946 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 TRGV10A0A0A0MS01 117 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 IGHV3-15A0A0B4J1V0 119 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 A0A0G2JLM5 398 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 SPTY2D1-AS1A0A0U1RR47 76 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 CXorf1O96002 111 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 TMEM42Q69YG0 159 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 SLC35E4Q6ICL7 350 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 CCDC144NLQ6NUI1 221 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 BHLHA15Q7RTS1 189 aaPredicted RBP11.76□□□□□ -0.53
PCF11-204ENST00000530660 SSX8Q7RTT4 187 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 KLRF1Q9NZS2 232 aa11.76□□□□□ -0.53
PCF11-204ENST00000530660 TIMM8BQ9Y5J9 83 aaPredicted RBP11.76□□□□□ -0.53
PCF11-204ENST00000530660 EXPH5Q8NEV8 1989 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 HELTA6NFD8 242 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 RHBDD2Q6NTF9 364 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 FAM222BQ8WU58 562 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 A0A0G2JMM0 328 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 A0A1W2PPB8 328 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 KIR3DP1A8MWS1 328 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 F2RL2O00254 374 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 GCHFRP30047 84 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 MFAP2P55001 183 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 RAB30Q15771 203 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 TMEM249Q2WGJ8 235 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 SSMEM1Q8WWF3 244 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 TXNDC17Q9BRA2 123 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 SPCS1Q9Y6A9 102 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 SDK2Q58EX2 2172 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 VPS13AQ96RL7 3174 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 FAM90A26D6RGX4 464 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 HIST1H1EP10412 219 aaKnown RBP11.75□□□□□ -0.53
PCF11-204ENST00000530660 IL23AQ9NPF7 189 aa11.75□□□□□ -0.53
PCF11-204ENST00000530660 LOC102723996A0A087X1L8 192 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 GAGE12HA6NDE8 117 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 LRRC30A6NM36 301 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 TLX3O43711 291 aaPredicted RBP11.74□□□□□ -0.53
PCF11-204ENST00000530660 CAMPP49913 170 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 PSG3Q16557 428 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 CEACAM21Q3KPI0 293 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 COX19Q49B96 90 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 IBA57Q5T440 356 aaKnown RBP11.74□□□□□ -0.53
PCF11-204ENST00000530660 TMEM251Q8N6I4 163 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 LIN7CQ9NUP9 197 aaKnown RBP11.74□□□□□ -0.53
PCF11-204ENST00000530660 WDR83OSQ9Y284 106 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 CRXO43186 299 aaPredicted RBP11.74□□□□□ -0.53
PCF11-204ENST00000530660 IGHV4-34P06331 123 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 CRYGSP22914 178 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 FOXA3P55318 350 aaPredicted RBP11.74□□□□□ -0.53
PCF11-204ENST00000530660 TCTAP57738 103 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 BPIFA4PQ86YQ2 179 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 POM121L2Q96KW2 1035 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 SAP30LQ9HAJ7 183 aa11.74□□□□□ -0.53
PCF11-204ENST00000530660 SMIM27A0A1W2PRY6 76 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 HLA-DRB1P01911 266 aa11.73□□□□□ -0.53
PCF11-204ENST00000530660 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.73□□□□□ -0.53
PCF11-204ENST00000530660 IGFLR1Q9H665 355 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms