RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 LEMD1Q68G75 181 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 MDS2Q8NDY4 140 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 RFESDQ8TAC1 157 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 NINJ1Q92982 152 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 OR2D2Q9H210 308 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 ROS1P08922 2347 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 TNRC6AQ8NDV7 1962 aaKnown RBP11.81□□□□□ -0.52
USP48-213ENST00000529637 NKX6-3A6NJ46 265 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 SP9P0CG40 484 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 FABP6P51161 128 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 MOB1BQ7L9L4 216 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 ERASQ7Z444 233 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 FAM19A2Q8N3H0 131 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 TMEM178AQ8NBL3 297 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 OR4B1Q8NGF8 309 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 KCNIP2Q9NS61 270 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 LOC105371242A0A075B767 164 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 HAND1O96004 215 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 AMTP48728 403 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 COTL1Q14019 142 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 ZNF497Q6ZNH5 498 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 RNF2Q99496 336 aa11.81□□□□□ -0.52
USP48-213ENST00000529637 IGHV3-43A0A0B4J1X8 118 aa11.8□□□□□ -0.52
USP48-213ENST00000529637 CLDN14O95500 239 aa11.8□□□□□ -0.52
USP48-213ENST00000529637 IGHV3-43DP0DP04 118 aa11.8□□□□□ -0.52
USP48-213ENST00000529637 ATP6V1FQ16864 119 aa11.8□□□□□ -0.52
USP48-213ENST00000529637 Q8IYB0 196 aa11.8□□□□□ -0.52
USP48-213ENST00000529637 OR52L2PQ8NGH6 319 aa11.8□□□□□ -0.52
USP48-213ENST00000529637 MRGPRDQ8TDS7 321 aa11.8□□□□□ -0.52
USP48-213ENST00000529637 YTHDF2Q9Y5A9 579 aaKnown RBP11.8□□□□□ -0.52
USP48-213ENST00000529637 RIF1Q5UIP0 2472 aaKnown RBP11.8□□□□□ -0.52
USP48-213ENST00000529637 TRBV6-6A0A0A6YYG2 114 aa11.8□□□□□ -0.52
USP48-213ENST00000529637 PIGBOS1A0A0B4J2F0 54 aa11.8□□□□□ -0.52
USP48-213ENST00000529637 DEFB108AA8MXU0 73 aa11.8□□□□□ -0.52
USP48-213ENST00000529637 FAM90A26D6RGX4 464 aa11.8□□□□□ -0.52
USP48-213ENST00000529637 IGHV1-2P23083 117 aa11.8□□□□□ -0.52
USP48-213ENST00000529637 HNRNPA3P51991 378 aaKnown RBP11.8□□□□□ -0.52
USP48-213ENST00000529637 IL36BQ9NZH7 164 aa11.8□□□□□ -0.52
USP48-213ENST00000529637 A0A1W2PPV4 95 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 C17orf98A8MV24 154 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 CDX4O14627 284 aaPredicted RBP11.79□□□□□ -0.52
USP48-213ENST00000529637 MPV17P39210 176 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 LGALS4P56470 323 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 RNF151Q2KHN1 245 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 SAPCD1Q5SSQ6 148 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 PRAMEF6Q5VXH4 476 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 LCN12Q6JVE5 192 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 OR8I2Q8N0Y5 310 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 GALMQ96C23 342 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 A0A1W2PS18 150 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 TIMM8AO60220 97 aaPredicted RBP11.79□□□□□ -0.52
USP48-213ENST00000529637 PSPNO60542 156 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 ZNF83P51522 516 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 UHRF2Q96PU4 802 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 UQCR10Q9UDW1 63 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 TP73-AS1Q9UF72 201 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 Q0VG73 95 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 EDDM3AQ14507 147 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 ASPHD1Q5U4P2 390 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 ZNF586Q9NXT0 402 aa11.79□□□□□ -0.52
USP48-213ENST00000529637 INTS1Q8N201 2190 aaKnown RBP11.78□□□□□ -0.52
USP48-213ENST00000529637 TMEM30CPA0ZSE6 113 aa11.78□□□□□ -0.52
USP48-213ENST00000529637 P0C879 139 aa11.78□□□□□ -0.52
USP48-213ENST00000529637 C3orf79P0CE67 100 aa11.78□□□□□ -0.52
USP48-213ENST00000529637 RPL31P62899 125 aaKnown RBP11.78□□□□□ -0.52
USP48-213ENST00000529637 MMD2Q8IY49 270 aa11.78□□□□□ -0.52
USP48-213ENST00000529637 KLF14Q8TD94 323 aaPredicted RBP11.78□□□□□ -0.52
USP48-213ENST00000529637 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.78□□□□□ -0.52
USP48-213ENST00000529637 VWC2Q2TAL6 325 aa11.78□□□□□ -0.52
USP48-213ENST00000529637 GMPPAQ96IJ6 420 aaPredicted RBP11.78□□□□□ -0.52
USP48-213ENST00000529637 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.78□□□□□ -0.52
USP48-213ENST00000529637 RNF212BA8MTL3 300 aa11.77□□□□□ -0.52
USP48-213ENST00000529637 C12orf77C9JDV5 145 aa11.77□□□□□ -0.52
USP48-213ENST00000529637 M0R296 226 aa11.77□□□□□ -0.52
USP48-213ENST00000529637 WISP2O76076 250 aa11.77□□□□□ -0.52
USP48-213ENST00000529637 KLF3P57682 345 aaPredicted RBP11.77□□□□□ -0.52
USP48-213ENST00000529637 ORAOV1Q8WV07 137 aa11.77□□□□□ -0.52
USP48-213ENST00000529637 NAT8BQ9UHF3 227 aa11.77□□□□□ -0.52
USP48-213ENST00000529637 C15orf62A8K5M9 175 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 C17orf112F2Z3M2 114 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 NKX2-8O15522 239 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 SRSF6Q13247 344 aaKnown RBP11.77□□□□□ -0.53
USP48-213ENST00000529637 UBE2V1Q13404 147 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 MIC13Q5XKP0 118 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 ALKBH7Q9BT30 221 aaPredicted RBP11.77□□□□□ -0.53
USP48-213ENST00000529637 FAM234AQ9H0X4 552 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 GAL3ST2Q9H3Q3 398 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 GP6Q9HCN6 339 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 NPIPB11E5RHQ5 1161 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 M0QZ24 198 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 IGHV3-13P01766 116 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 IGHV3-7P01780 117 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 HBZP02008 142 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 CD1BP29016 333 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 TCL1AP56279 114 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 SPATA31B1PQ5VZV4 182 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 NIT1Q86X76 327 aa11.77□□□□□ -0.53
USP48-213ENST00000529637 BOD1L1Q8NFC6 3051 aa11.76□□□□□ -0.53
USP48-213ENST00000529637 ZNF253O75346 499 aa11.76□□□□□ -0.53
USP48-213ENST00000529637 ASPMQ8IZT6 3477 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms