RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 RNASEH2CQ8TDP1 164 aaKnown RBP6.16□□□□□ -1.42
CTNND1-218ENST00000528232 OR5P3Q8WZ94 311 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 MYLKQ15746 1914 aa6.16□□□□□ -1.42
CTNND1-218ENST00000528232 FRMPD3Q5JV73 1810 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 RBFOX2O43251 390 aaKnown RBP eCLIP6.15□□□□□ -1.424e-7■■■■□ 19.5
CTNND1-218ENST00000528232 UNC119Q13432 240 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 IZUMO4Q1ZYL8 232 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 FGF11Q92914 225 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 C20orf144Q9BQM9 153 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 HEXA-AS1Q9H8Q6 139 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 IL36BQ9NZH7 164 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 IGKV1D-43A0A0B4J1Z2 117 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 H3BUT2 72 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 J3QR06 171 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 CLDN14O95500 239 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 SRP19P09132 144 aaKnown RBP6.15□□□□□ -1.42
CTNND1-218ENST00000528232 CA7P43166 264 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 LGALS7P47929 136 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 ARTNQ5T4W7 220 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 ZNF714Q96N38 554 aa6.15□□□□□ -1.42
CTNND1-218ENST00000528232 MRPL16Q9NX20 251 aaKnown RBP6.15□□□□□ -1.42
CTNND1-218ENST00000528232 KLRB1Q12918 225 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 IMMP1LQ96LU5 166 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 SCN2AQ99250 2005 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 TPRP12270 2363 aaKnown RBP6.15□□□□□ -1.43
CTNND1-218ENST00000528232 A8MWP6 167 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 F8VVB4 439 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 F8VWA3 439 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 CD5LO43866 347 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 ZIC3O60481 467 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 ZNF324O75467 553 aaPredicted RBP6.15□□□□□ -1.43
CTNND1-218ENST00000528232 TMEM30BQ3MIR4 351 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 GAGE13Q4V321 117 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 TPTE2P1Q5T6R2 138 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 OR4X1Q8NH49 305 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 ZNF502Q8TBZ5 544 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 SSMEM1Q8WWF3 244 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 RASL11BQ9BPW5 248 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 SOSTQ9BQB4 213 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 PLSCR2Q9NRY7 297 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 GBF1Q92538 1859 aa6.15□□□□□ -1.43
CTNND1-218ENST00000528232 LOC102723996A0A087X1L8 192 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 hCG_38984A0A1B0GV85 526 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 RAMP1O60894 148 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 KLK2P20151 261 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 ZNF137PP52743 207 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 ZNF324BQ6AW86 544 aaPredicted RBP6.14□□□□□ -1.43
CTNND1-218ENST00000528232 PQLC2Q6ZP29 291 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 Q8WTZ3 238 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 SFXN3Q9BWM7 321 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 SDF2L1Q9HCN8 221 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 COX11Q9Y6N1 276 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 RP1L1Q8IWN7 2480 aaPredicted RBP6.14□□□□□ -1.43
CTNND1-218ENST00000528232 KNL1Q8NG31 2342 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 TRAV8-4A0A0B4J246 113 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 A8MWV9 139 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 MPV17P39210 176 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 ZP1P60852 638 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 RPL31P62899 125 aaKnown RBP6.14□□□□□ -1.43
CTNND1-218ENST00000528232 KLF14Q8TD94 323 aaPredicted RBP6.14□□□□□ -1.43
CTNND1-218ENST00000528232 GPR146Q96CH1 333 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 MAP1LC3AQ9H492 121 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 GEMIN7Q9H840 131 aaKnown RBP6.14□□□□□ -1.43
CTNND1-218ENST00000528232 INSIG2Q9Y5U4 225 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 KLF2Q9Y5W3 355 aaPredicted RBP6.14□□□□□ -1.43
CTNND1-218ENST00000528232 TRAV8-2A0A0B4J237 113 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 OR11H12B2RN74 326 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 RFPL3SP0C7P2 107 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 NR2C2APQ86WQ0 139 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 MMD2Q8IY49 270 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 OR11H1Q8NG94 326 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 OR11H2Q8NH07 326 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 C1RLQ9NZP8 487 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 TANC1Q9C0D5 1861 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 LOC389332A0A1B0GUA5 103 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 H7C2G1 150 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 SNRPCP09234 159 aaKnown RBP6.14□□□□□ -1.43
CTNND1-218ENST00000528232 TCF24Q7RTU0 167 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 ITLN1Q8WWA0 313 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 SPSB4Q96A44 273 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 CST9LQ9H4G1 147 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 GAS1P54826 345 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 C19orf54Q5BKX5 351 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 SPANXN1Q5VSR9 72 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 CLEC2AQ6UVW9 174 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 OR52M1Q8NGK5 317 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 C1QTNF5Q9BXJ0 243 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 JPT1Q9UK76 154 aa6.14□□□□□ -1.43
CTNND1-218ENST00000528232 PGPEP1LA6NFU8 196 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 MMP23AO75900 390 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 ATP5LO75964 103 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 ZNF708P17019 499 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 PTGDSP41222 190 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 ZNF414Q96IQ9 312 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 CCL13Q99616 98 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 NPVFQ9HCQ7 196 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 IDI2-AS1Q9NZ38 188 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 HOXA4Q00056 320 aaPredicted RBP6.13□□□□□ -1.43
CTNND1-218ENST00000528232 TGIF1Q15583 401 aa6.13□□□□□ -1.43
CTNND1-218ENST00000528232 ZNF818PQ6ZRF7 136 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms