RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 DEFB108AA8MXU0 73 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 BMPR1BO00238 502 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 TOMM40O96008 361 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 CA2P00918 260 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 AMY1AP04745 511 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 FXYD3Q14802 87 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 MRPL54Q6P161 138 aaKnown RBP12.16□□□□□ -0.46
CAPN1-214ENST00000528165 Q6ZVH6 145 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 STPG3Q8N7X2 389 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 BOKQ9UMX3 212 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-214ENST00000528165 PRSS46E5RG02 174 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 K7EP13 123 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 FCGR3BO75015 233 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 CGAP01215 116 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 CCL4P13236 92 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 OTX2P32243 289 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 PMCHL1Q16048 86 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 TIGITQ495A1 244 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 ABHD12Q8N2K0 398 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 TSKUQ8WUA8 353 aa12.16□□□□□ -0.46
CAPN1-214ENST00000528165 AREGP15514 252 aa12.15□□□□□ -0.46
CAPN1-214ENST00000528165 CDKN1BP46527 198 aa12.15□□□□□ -0.46
CAPN1-214ENST00000528165 Q0VFX4 171 aa12.15□□□□□ -0.46
CAPN1-214ENST00000528165 ALKBH7Q9BT30 221 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-214ENST00000528165 OSTCQ9NRP0 149 aa12.15□□□□□ -0.46
CAPN1-214ENST00000528165 CACNA1EQ15878 2313 aa12.15□□□□□ -0.46
CAPN1-214ENST00000528165 GFRA3O60609 400 aa12.15□□□□□ -0.46
CAPN1-214ENST00000528165 CRYBB3P26998 211 aa12.15□□□□□ -0.46
CAPN1-214ENST00000528165 SSTR5P35346 364 aa12.15□□□□□ -0.46
CAPN1-214ENST00000528165 VDAC2P45880 294 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-214ENST00000528165 RAB31Q13636 194 aa12.15□□□□□ -0.46
CAPN1-214ENST00000528165 AARDQ4LEZ3 155 aa12.15□□□□□ -0.46
CAPN1-214ENST00000528165 TEPPQ6URK8 271 aa12.15□□□□□ -0.46
CAPN1-214ENST00000528165 RFESDQ8TAC1 157 aa12.15□□□□□ -0.46
CAPN1-214ENST00000528165 LSM4Q9Y4Z0 139 aaKnown RBP12.15□□□□□ -0.46
CAPN1-214ENST00000528165 FAM90A9PA6NNJ1 464 aa12.15□□□□□ -0.47
CAPN1-214ENST00000528165 APCSP02743 223 aa12.15□□□□□ -0.47
CAPN1-214ENST00000528165 FOXF2Q12947 444 aa12.15□□□□□ -0.47
CAPN1-214ENST00000528165 MAJINQ3KP22 176 aa12.15□□□□□ -0.47
CAPN1-214ENST00000528165 MORN2Q502X0 79 aa12.15□□□□□ -0.47
CAPN1-214ENST00000528165 ZNF439Q8NDP4 499 aa12.15□□□□□ -0.47
CAPN1-214ENST00000528165 OR2D3Q8NGH3 330 aa12.15□□□□□ -0.47
CAPN1-214ENST00000528165 OR5B3Q8NH48 314 aa12.15□□□□□ -0.47
CAPN1-214ENST00000528165 IL19Q9UHD0 177 aa12.15□□□□□ -0.47
CAPN1-214ENST00000528165 CDC42EP3Q9UKI2 254 aa12.15□□□□□ -0.47
CAPN1-214ENST00000528165 DOCK7Q96N67 2140 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 ERVK-16P61578 105 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 LCN12Q6JVE5 192 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 MDP1Q86V88 176 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 LYG1Q8N1E2 194 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 COQ2Q96H96 371 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 CLEC7AQ9BXN2 247 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 SERTAD4Q9NUC0 356 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 IGHV2-26A0A0B4J1V2 119 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 CELA3AP09093 270 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 GPR12P47775 334 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 PLGLB1Q02325 96 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 PSG5Q15238 335 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 SPINK14Q6IE38 97 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 VASH2Q86V25 355 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 OR4C5Q8NGB2 326 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 OR52E5Q8NH55 327 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 GP6Q9HCN6 339 aa12.14□□□□□ -0.47
CAPN1-214ENST00000528165 IGHV2OR16-5A0A0B4J2B6 119 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 ACTL6BO94805 426 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 COL8A2P25067 703 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 FBLN7Q53RD9 439 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 TPRX1Q8N7U7 411 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 IFI44Q8TCB0 444 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 SAP25Q8TEE9 199 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 NANOS1Q8WY41 292 aaKnown RBP12.13□□□□□ -0.47
CAPN1-214ENST00000528165 C1orf159Q96HA4 380 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 FAM234AQ9H0X4 552 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 MRPS17Q9Y2R5 130 aaKnown RBP12.13□□□□□ -0.47
CAPN1-214ENST00000528165 ISLRO14498 428 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 WNT9BO14905 357 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 CEACAM8P31997 349 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-214ENST00000528165 DUTP33316 252 aaKnown RBP12.13□□□□□ -0.47
CAPN1-214ENST00000528165 LTC4SQ16873 150 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 TBC1D28Q2M2D7 210 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 ZNF766Q5HY98 468 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 FSCN3Q9NQT6 498 aa12.13□□□□□ -0.47
CAPN1-214ENST00000528165 MGST1P10620 155 aaKnown RBP12.12□□□□□ -0.47
CAPN1-214ENST00000528165 TNFSF4P23510 183 aa12.12□□□□□ -0.47
CAPN1-214ENST00000528165 SELENOVP59797 346 aa12.12□□□□□ -0.47
CAPN1-214ENST00000528165 IBA57Q5T440 356 aaKnown RBP12.12□□□□□ -0.47
CAPN1-214ENST00000528165 MIR17HGQ75NE6 70 aa12.12□□□□□ -0.47
CAPN1-214ENST00000528165 PPP1R32Q7Z5V6 425 aa12.12□□□□□ -0.47
CAPN1-214ENST00000528165 CXorf67Q86X51 503 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-214ENST00000528165 PNKDQ8N490 385 aa12.12□□□□□ -0.47
CAPN1-214ENST00000528165 CDX2Q99626 313 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-214ENST00000528165 ZNF331Q9NQX6 463 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-214ENST00000528165 TMEM167BQ9NRX6 74 aa12.12□□□□□ -0.47
CAPN1-214ENST00000528165 MRPL27Q9P0M9 148 aaKnown RBP12.12□□□□□ -0.47
CAPN1-214ENST00000528165 ARL2-SNX15V9GYD0 113 aa12.12□□□□□ -0.47
CAPN1-214ENST00000528165 LOC105371242A0A075B767 164 aa12.12□□□□□ -0.47
CAPN1-214ENST00000528165 TRAV9-2A0A087WT02 112 aa12.12□□□□□ -0.47
CAPN1-214ENST00000528165 IGHV1-69-2A0A0G2JMI3 117 aa12.12□□□□□ -0.47
CAPN1-214ENST00000528165 USF1P22415 310 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms