RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 SLC25A46Q96AG3 418 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 SRSF8Q9BRL6 282 aaKnown RBP7.96□□□□□ -1.14
CPSF1-203ENST00000527916 SLC5A7Q9GZV3 580 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 PLEKHA2Q9HB19 425 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 PEMTQ9UBM1 199 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 ADAM30Q9UKF2 790 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 DMRT1Q9Y5R6 373 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 DNAH10Q8IVF4 4471 aa7.96□□□□□ -1.14
CPSF1-203ENST00000527916 KIAA1109Q2LD37 5005 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 A0A1B0GW64 132 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 NUPR2A6NF83 97 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 HMX3A6NHT5 357 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 BMPR1BO00238 502 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 TNFSF12O43508 249 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 TPPPO94811 219 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 PRH1P02810 166 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 NQO2P16083 231 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 HIST1H1BP16401 226 aaKnown RBP7.95□□□□□ -1.14
CPSF1-203ENST00000527916 CTRB1P17538 263 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 HLA-GP17693 338 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 PSMB6P28072 239 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 GNRHRP30968 328 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 TAS2R20P59543 309 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 EXOSC2Q13868 293 aaKnown RBP7.95□□□□□ -1.14
CPSF1-203ENST00000527916 C15orf32Q32M92 178 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 TMEM69Q5SWH9 247 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 CTRB2Q6GPI1 263 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 OR4A47Q6IF82 309 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 ZNF818PQ6ZRF7 136 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 Q8N402 240 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 SAMD12Q8N8I0 201 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 FANCD2OSQ96PS1 177 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 FYTTD1Q96QD9 318 aaKnown RBP7.95□□□□□ -1.14
CPSF1-203ENST00000527916 GPHA2Q96T91 129 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 THAP7Q9BT49 309 aaPredicted RBP7.95□□□□□ -1.14
CPSF1-203ENST00000527916 IFT46Q9NQC8 304 aa7.95□□□□□ -1.14
CPSF1-203ENST00000527916 DPPA5A6NC42 116 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 CGB1A6NKQ9 187 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 LGALS9O00182 355 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 SULT1C2O00338 296 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 UPK2O00526 184 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 GGCTO75223 188 aaKnown RBP7.94□□□□□ -1.14
CPSF1-203ENST00000527916 OR2J3O76001 311 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 PRSS3P35030 304 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 RFX2P48378 723 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 TAS2R46P59540 309 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 FXYD4P59646 89 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 OR2B8PP59922 312 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 HERV-K104P61576 105 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 LSM3P62310 102 aaKnown RBP7.94□□□□□ -1.14
CPSF1-203ENST00000527916 LINC00322Q6ZN03 302 aaPredicted RBP7.94□□□□□ -1.14
CPSF1-203ENST00000527916 SSX9Q7RTT3 188 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 GPHB5Q86YW7 130 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 RPP25LQ8N5L8 163 aaKnown RBP7.94□□□□□ -1.14
CPSF1-203ENST00000527916 MOB3AQ96BX8 217 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 PLEKHA3Q9HB20 300 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 EHFQ9NZC4 300 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 COMMD9Q9P000 198 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 FBXL7Q9UJT9 491 aa7.94□□□□□ -1.14
CPSF1-203ENST00000527916 TRBV7-1A0A0A6YYK4 115 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 SMIM31A0A1B0GVY4 71 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 MEIS3P1A6NDR6 274 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 PGLYRP1O75594 196 aaPredicted RBP7.93□□□□□ -1.14
CPSF1-203ENST00000527916 APOA1P02647 267 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 FCER2P06734 321 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 AREGP15514 252 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 F2RP25116 425 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 CD81P60033 236 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 PMS2P11Q13670 270 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 THOC7Q6I9Y2 204 aaKnown RBP7.93□□□□□ -1.14
CPSF1-203ENST00000527916 LPCAT3Q6P1A2 487 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 LYSMD2Q8IV50 215 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 LAX1Q8IWV1 398 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 OR5H2Q8NGV7 314 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 OR6F1Q8NGZ6 308 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 GPX8Q8TED1 209 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 EEF1AKMT3Q96AZ1 226 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 CXorf58Q96LI9 332 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 ZNF2Q9BSG1 426 aaPredicted RBP7.93□□□□□ -1.14
CPSF1-203ENST00000527916 FUNDC2Q9BWH2 189 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 HRASLSQ9HDD0 168 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 FAM212BQ9NTI7 297 aaPredicted RBP7.93□□□□□ -1.14
CPSF1-203ENST00000527916 SLC2A8Q9NY64 477 aa7.93□□□□□ -1.14
CPSF1-203ENST00000527916 KLK5Q9Y337 293 aaPredicted RBP7.93□□□□□ -1.14
CPSF1-203ENST00000527916 IGLV11-55A0A075B6I3 123 aa7.92□□□□□ -1.14
CPSF1-203ENST00000527916 NDUFB8O95169 186 aa7.92□□□□□ -1.14
CPSF1-203ENST00000527916 PMP2P02689 132 aa7.92□□□□□ -1.14
CPSF1-203ENST00000527916 DEFA4P12838 97 aa7.92□□□□□ -1.14
CPSF1-203ENST00000527916 AADACL3Q5VUY0 350 aa7.92□□□□□ -1.14
CPSF1-203ENST00000527916 HSD17B13Q7Z5P4 300 aaPredicted RBP7.92□□□□□ -1.14
CPSF1-203ENST00000527916 TMEM17Q86X19 198 aa7.92□□□□□ -1.14
CPSF1-203ENST00000527916 CMTM1Q8IZ96 169 aa7.92□□□□□ -1.14
CPSF1-203ENST00000527916 DMBX1Q8NFW5 382 aa7.92□□□□□ -1.14
CPSF1-203ENST00000527916 OR51H1Q8NH63 302 aa7.92□□□□□ -1.14
CPSF1-203ENST00000527916 NEURL2Q9BR09 285 aa7.92□□□□□ -1.14
CPSF1-203ENST00000527916 COMMD5Q9GZQ3 224 aa7.92□□□□□ -1.14
CPSF1-203ENST00000527916 SCPEP1Q9HB40 452 aa7.92□□□□□ -1.14
CPSF1-203ENST00000527916 TMEM140Q9NV12 185 aa7.92□□□□□ -1.14
CPSF1-203ENST00000527916 TECRQ9NZ01 308 aaKnown RBP7.92□□□□□ -1.14
CPSF1-203ENST00000527916 THYN1Q9P016 225 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms