RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 ZNF319Q9P2F9 582 aa9.32□□□□□ -0.92
VPS11-202ENST00000526829 SMIM9A6NGZ8 99 aa9.32□□□□□ -0.92
VPS11-202ENST00000526829 LMX1BO60663 402 aa9.32□□□□□ -0.92
VPS11-202ENST00000526829 HAND1O96004 215 aa9.32□□□□□ -0.92
VPS11-202ENST00000526829 SRP19P09132 144 aaKnown RBP9.32□□□□□ -0.92
VPS11-202ENST00000526829 FUT3P21217 361 aa9.32□□□□□ -0.92
VPS11-202ENST00000526829 PPP1CCP36873 323 aaKnown RBP9.32□□□□□ -0.92
VPS11-202ENST00000526829 APOBEC1P41238 236 aaKnown RBP9.32□□□□□ -0.92
VPS11-202ENST00000526829 RPL27P61353 136 aaKnown RBP9.32□□□□□ -0.92
VPS11-202ENST00000526829 HIST1H3AP68431 136 aa9.32□□□□□ -0.92
VPS11-202ENST00000526829 C1orf140Q5VVS0 124 aa9.32□□□□□ -0.92
VPS11-202ENST00000526829 ZNF343Q6P1L6 599 aa9.32□□□□□ -0.92
VPS11-202ENST00000526829 FGGYQ96C11 551 aa9.32□□□□□ -0.92
VPS11-202ENST00000526829 ACY3Q96HD9 319 aa9.32□□□□□ -0.92
VPS11-202ENST00000526829 LSM5Q9Y4Y9 91 aaKnown RBP9.32□□□□□ -0.92
VPS11-202ENST00000526829 COL6A5A8TX70 2615 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 A0A0A6YYD4 124 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 IGHV1-69-2A0A0G2JMI3 117 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 INAFM1C9JVW0 142 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 H7BYZ3 331 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 SLC16A7O60669 478 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 BGLAPP02818 100 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 PGCP20142 388 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 PAX9P55771 341 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 KRTAP1-1Q07627 177 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 CLEC12BQ2HXU8 276 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 MBNL2Q5VZF2 373 aaKnown RBP9.31□□□□□ -0.92
VPS11-202ENST00000526829 CBLN3Q6UW01 205 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 NEGR1Q7Z3B1 354 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 ZNF429Q86V71 674 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 SGPP2Q8IWX5 399 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 APH1AQ96BI3 265 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 RARRES2Q99969 163 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 MAP1LC3CQ9BXW4 147 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 SRXN1Q9BYN0 137 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 TRAPPC2LQ9UL33 140 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 ATRQ13535 2644 aa9.31□□□□□ -0.92
VPS11-202ENST00000526829 FTCDNL1E5RQL4 147 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 HSPB1P04792 205 aaKnown RBP9.3□□□□□ -0.92
VPS11-202ENST00000526829 MRPS34P82930 218 aaKnown RBP9.3□□□□□ -0.92
VPS11-202ENST00000526829 RNASEKQ6P5S7 137 aaKnown RBP9.3□□□□□ -0.92
VPS11-202ENST00000526829 NOXO1Q8NFA2 376 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 FAM213BQ8TBF2 198 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 ST8SIA1Q92185 356 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 KIAA1456Q9P272 454 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 UQCR10Q9UDW1 63 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 MRPS16Q9Y3D3 137 aaKnown RBP9.3□□□□□ -0.92
VPS11-202ENST00000526829 FREM1Q5H8C1 2179 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 A0A1B0GUS0 222 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 A0A1W2PNR3 127 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 A0A1W2PR80 420 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 OVOL3O00110 214 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 EFNA2O43921 213 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 IGHMP01871 453 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 GATA3P23771 443 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 RND2P52198 227 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 IL13RA2Q14627 380 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 CD300EQ496F6 205 aaPredicted RBP9.3□□□□□ -0.92
VPS11-202ENST00000526829 LRRC10Q5BKY1 277 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 OTPQ5XKR4 325 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 Q6ZT83 130 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 OR5D14Q8NGL3 314 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 TBX15Q96SF7 602 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 TXNIPQ9H3M7 391 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 TMEM242Q9NWH2 141 aa9.3□□□□□ -0.92
VPS11-202ENST00000526829 CHD3Q12873 2000 aaKnown RBP9.29□□□□□ -0.92
VPS11-202ENST00000526829 TRAV36DV7A0A075B6V5 113 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 IGHV3-15A0A0B4J1V0 119 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 SOCS1O15524 211 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 CTLA4P16410 223 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 FKBP2P26885 142 aaKnown RBP9.29□□□□□ -0.92
VPS11-202ENST00000526829 ZNF93P35789 620 aaPredicted RBP9.29□□□□□ -0.92
VPS11-202ENST00000526829 TMEM50BP56557 158 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 HSD52Q0P140 79 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 ZNF506Q5JVG8 444 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 SPSB3Q6PJ21 355 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 TOMM20LQ6UXN7 152 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 ZNF418Q8TF45 676 aaPredicted RBP9.29□□□□□ -0.92
VPS11-202ENST00000526829 MRPL24Q96A35 216 aaKnown RBP9.29□□□□□ -0.92
VPS11-202ENST00000526829 RCHY1Q96PM5 261 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 SPATA25Q9BR10 227 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 NIPSNAP3BQ9BS92 247 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 SH3BGRL3Q9H299 93 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 PLK3Q9H4B4 646 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 EHFQ9NZC4 300 aa9.29□□□□□ -0.92
VPS11-202ENST00000526829 SONP18583 2426 aaKnown RBP9.29□□□□□ -0.92
VPS11-202ENST00000526829 CRYM-AS1A6NIL9 109 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 C11orf98E9PRG8 122 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 CRLF1O75462 422 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 MPIG6BO95866 241 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 IFNA1P01562 189 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 CRYGBP07316 175 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 NPBWR2P48146 333 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 AMTP48728 403 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 RND3P61587 244 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 ARFRP1Q13795 201 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 ZNF672Q499Z4 452 aaPredicted RBP9.28□□□□□ -0.92
VPS11-202ENST00000526829 GLIPR1L1Q6UWM5 242 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 OR10G4Q8NGN3 311 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 OR1B1Q8NGR6 318 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms