RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 MYOD1P15172 320 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 UCP1P25874 307 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 FAUP35544 74 aaKnown RBP8.48□□□□□ -1.05
NEDD8-204ENST00000526430 ECI1P42126 302 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 KIR2DS2P43631 304 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 CATR1Q13166 79 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 TMEM187Q14656 261 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 PRSS8Q16651 343 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 KHDC1LQ5JSQ8 128 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 CADM3Q8N126 398 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 TCTEX1D1Q8N7M0 179 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 OR4S2Q8NH73 311 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 TMEM167AQ8TBQ9 72 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 GALNT14Q96FL9 552 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 RHOVQ96L33 236 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 NOL4LQ96MY1 436 aaPredicted RBP8.48□□□□□ -1.05
NEDD8-204ENST00000526430 P2RX4Q99571 388 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 TSNAXQ99598 290 aaKnown RBP8.48□□□□□ -1.05
NEDD8-204ENST00000526430 NAA60Q9H7X0 242 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 ZMAT4Q9H898 229 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 NUBP2Q9Y5Y2 271 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 KIAA1109Q2LD37 5005 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 A0A0G2JRQ6 117 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 TEX13DA0A0J9YY54 714 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-204ENST00000526430 DBX1A6NMT0 343 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 TCRBP04435 133 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 IGF1P05019 195 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 RPA2P15927 270 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 MYCNOSP40205 109 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 MECP2P51608 486 aaKnown RBP8.47□□□□□ -1.05
NEDD8-204ENST00000526430 CRIP2P52943 208 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-204ENST00000526430 TAS2R31P59538 309 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 CFHR3Q02985 330 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 RBMS2Q15434 407 aaKnown RBP8.47□□□□□ -1.05
NEDD8-204ENST00000526430 ASPHD1Q5U4P2 390 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 OR4A47Q6IF82 309 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 ZNF562Q6V9R5 426 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 Q6ZRM9 215 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 SLC25A42Q86VD7 318 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 PPP1R27Q86WC6 154 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 SELENOHQ8IZQ5 122 aaKnown RBP8.47□□□□□ -1.05
NEDD8-204ENST00000526430 DUSP18Q8NEJ0 188 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 CLCC1Q96S66 551 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 RASL11BQ9BPW5 248 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 TMEM222Q9H0R3 208 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 OR51J1Q9H342 316 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 ZNF430Q9H8G1 570 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-204ENST00000526430 COPZ2Q9P299 210 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 LINC00527Q9UJ94 153 aa8.47□□□□□ -1.05
NEDD8-204ENST00000526430 MUC4Q99102 2169 aa8.46□□□□□ -1.05
NEDD8-204ENST00000526430 UPK2O00526 184 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 CA2P00918 260 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 OR9G9P0C7N8 305 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 SPNP16150 400 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 AKR1C4P17516 323 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 PPIFP30405 207 aaKnown RBP8.46□□□□□ -1.06
NEDD8-204ENST00000526430 G6PCP35575 357 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 INPP1P49441 399 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 IZUMO4Q1ZYL8 232 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 TMEM128Q5BJH2 165 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 SSX9Q7RTT3 188 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 NRARPQ7Z6K4 114 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 CD300LFQ8TDQ1 290 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 TMEM56Q96MV1 263 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 SCGB3A2Q96PL1 93 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 BET1LQ9NYM9 111 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 COMMD9Q9P000 198 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 ZNF580Q9UK33 172 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 TMEM56-RWDD3S4R434 201 aa8.46□□□□□ -1.06
NEDD8-204ENST00000526430 MARCH11A6NNE9 402 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 G3V318 75 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 ATP6V0E1O15342 81 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 SOX15O60248 233 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 KBTBD11O94819 623 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 OR2A4O95047 310 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 HRASP01112 189 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 KRASP01116 189 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 NQO2P16083 231 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 ANXA7P20073 488 aaKnown RBP8.45□□□□□ -1.06
NEDD8-204ENST00000526430 RPL23AP62750 156 aaKnown RBP8.45□□□□□ -1.06
NEDD8-204ENST00000526430 PPP1R1AQ13522 171 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 KIAA0141Q14154 515 aaPredicted RBP8.45□□□□□ -1.06
NEDD8-204ENST00000526430 ANKRD55Q3KP44 614 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 C9orf152Q5JTZ5 239 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 C10orf55Q5SWW7 151 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 C9orf66Q5T8R8 295 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 STPG2Q8N412 459 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 CCDC71LQ8N9Z2 235 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 MINDY2Q8NBR6 621 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 OR2A7Q96R45 310 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 TSC22D3Q99576 134 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 FAM103A1Q9BTL3 118 aaKnown RBP8.45□□□□□ -1.06
NEDD8-204ENST00000526430 ALX4Q9H161 411 aaPredicted RBP8.45□□□□□ -1.06
NEDD8-204ENST00000526430 TMEM140Q9NV12 185 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 KIAA1456Q9P272 454 aa8.45□□□□□ -1.06
NEDD8-204ENST00000526430 C14orf166Q9Y224 244 aaKnown RBP8.45□□□□□ -1.06
NEDD8-204ENST00000526430 ZNF256Q9Y2P7 627 aaPredicted RBP8.45□□□□□ -1.06
NEDD8-204ENST00000526430 A0A0B4J293 547 aa8.44□□□□□ -1.06
NEDD8-204ENST00000526430 CENPXA8MT69 81 aa8.44□□□□□ -1.06
NEDD8-204ENST00000526430 SFT2D2O95562 160 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms