RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 IGLV2-14P01704 120 aa10.67□□□□□ -0.7
CPSF1-201ENST00000526271 FCGR3AP08637 254 aa10.67□□□□□ -0.7
CPSF1-201ENST00000526271 FOLR2P14207 255 aa10.67□□□□□ -0.7
CPSF1-201ENST00000526271 BRWD1-AS2P59051 145 aa10.67□□□□□ -0.7
CPSF1-201ENST00000526271 RPL30P62888 115 aaKnown RBP10.67□□□□□ -0.7
CPSF1-201ENST00000526271 TNXAQ16473 311 aa10.67□□□□□ -0.7
CPSF1-201ENST00000526271 TEX45Q8NA69 505 aa10.67□□□□□ -0.7
CPSF1-201ENST00000526271 OR4A4PQ8NGN8 299 aa10.67□□□□□ -0.7
CPSF1-201ENST00000526271 SCPEP1Q9HB40 452 aa10.67□□□□□ -0.7
CPSF1-201ENST00000526271 ANAPC10Q9UM13 185 aa10.67□□□□□ -0.7
CPSF1-201ENST00000526271 V9GYH0 126 aa10.67□□□□□ -0.7
CPSF1-201ENST00000526271 TMEM213A2RRL7 107 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 HMX3A6NHT5 357 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 BET1O15155 118 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 OR2J3O76001 311 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 CRYZL1O95825 349 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 IGHV3-23P01764 117 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 IL6RP08887 468 aaPredicted RBP10.66□□□□□ -0.7
CPSF1-201ENST00000526271 SAA1P0DJI8 122 aaPredicted RBP10.66□□□□□ -0.7
CPSF1-201ENST00000526271 NAT1P18440 290 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 CBX5P45973 191 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 IL18Q14116 193 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 HOGA1Q86XE5 327 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 SNX29P2Q8IUI4 249 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 TMEM61Q8N0U2 210 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 TTC9CQ8N5M4 171 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 FANCD2OSQ96PS1 177 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 MLXQ9UH92 298 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 S4R3C0 116 aa10.66□□□□□ -0.7
CPSF1-201ENST00000526271 FAT2Q9NYQ8 4349 aa10.65□□□□□ -0.7
CPSF1-201ENST00000526271 CGB1A6NKQ9 187 aa10.65□□□□□ -0.7
CPSF1-201ENST00000526271 GABARAPH6UMI1 98 aa10.65□□□□□ -0.7
CPSF1-201ENST00000526271 OR2C1O95371 312 aa10.65□□□□□ -0.7
CPSF1-201ENST00000526271 MYOD1P15172 320 aa10.65□□□□□ -0.7
CPSF1-201ENST00000526271 MRPS10P82664 201 aaKnown RBP10.65□□□□□ -0.7
CPSF1-201ENST00000526271 H1FOOQ8IZA3 346 aaPredicted RBP10.65□□□□□ -0.7
CPSF1-201ENST00000526271 GVQW1Q8N7I0 195 aa10.65□□□□□ -0.7
CPSF1-201ENST00000526271 IL17DQ8TAD2 202 aa10.65□□□□□ -0.7
CPSF1-201ENST00000526271 PHB2Q99623 299 aa10.65□□□□□ -0.7
CPSF1-201ENST00000526271 ST6GALNAC5Q9BVH7 336 aa10.65□□□□□ -0.7
CPSF1-201ENST00000526271 PEMTQ9UBM1 199 aa10.65□□□□□ -0.7
CPSF1-201ENST00000526271 DNAH17Q9UFH2 4485 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 DNAH2Q9P225 4427 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 FAM223BA6NKX1 122 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 GSTZ1O43708 216 aaPredicted RBP10.64□□□□□ -0.71
CPSF1-201ENST00000526271 NDUFB8O95169 186 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 ATP5G2Q06055 141 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 EIF4EBP1Q13541 118 aaPredicted RBP10.64□□□□□ -0.71
CPSF1-201ENST00000526271 ZNF79Q15937 498 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 GUCA2BQ16661 112 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 C15orf32Q32M92 178 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 SPANXN2Q5MJ10 180 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 LYSMD2Q8IV50 215 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 FAM223AQ8IWN6 122 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 VKORC1L1Q8N0U8 176 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 RPP25LQ8N5L8 163 aaKnown RBP10.64□□□□□ -0.71
CPSF1-201ENST00000526271 OR52I2Q8NH67 350 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 FCAMRQ8WWV6 532 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 MTFP1Q9UDX5 166 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 PCLOQ9Y6V0 5065 aa10.64□□□□□ -0.71
CPSF1-201ENST00000526271 IGKV1D-13A0A0B4J2D9 117 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 MEIS3P1A6NDR6 274 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 LGALS9O00182 355 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 DIRAS3O95661 229 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 IGKV1-13P0DP09 117 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 AREGP15514 252 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 CBLN1P23435 193 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 SSBP1Q04837 148 aaKnown RBP10.63□□□□□ -0.71
CPSF1-201ENST00000526271 TATDN3Q17R31 274 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 KLK9Q2XQG4 91 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 UNQ9165/PRO28630Q6UXU0 137 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 MFSD4AQ8N468 514 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 BEST4Q8NFU0 473 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 SMIM4Q8WVI0 70 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 ZNF414Q96IQ9 312 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 SRRQ9GZT4 340 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 SLC2A8Q9NY64 477 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 KLK11Q9UBX7 282 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 ANXA10Q9UJ72 324 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 KLK9Q9UKQ9 250 aa10.63□□□□□ -0.71
CPSF1-201ENST00000526271 RBMX2Q9Y388 322 aaKnown RBP10.63□□□□□ -0.71
CPSF1-201ENST00000526271 LY6G6CO95867 125 aa10.62□□□□□ -0.71
CPSF1-201ENST00000526271 CBX3Q13185 183 aa10.62□□□□□ -0.71
CPSF1-201ENST00000526271 PMS2P11Q13670 270 aa10.62□□□□□ -0.71
CPSF1-201ENST00000526271 CDK10Q15131 360 aa10.62□□□□□ -0.71
CPSF1-201ENST00000526271 VMA21Q3ZAQ7 101 aa10.62□□□□□ -0.71
CPSF1-201ENST00000526271 GPHB5Q86YW7 130 aa10.62□□□□□ -0.71
CPSF1-201ENST00000526271 NECAP1Q8NC96 275 aa10.62□□□□□ -0.71
CPSF1-201ENST00000526271 OR10J5Q8NHC4 309 aa10.62□□□□□ -0.71
CPSF1-201ENST00000526271 DYNLRB2Q8TF09 96 aa10.62□□□□□ -0.71
CPSF1-201ENST00000526271 S100ZQ8WXG8 99 aa10.62□□□□□ -0.71
CPSF1-201ENST00000526271 GPHA2Q96T91 129 aa10.62□□□□□ -0.71
CPSF1-201ENST00000526271 SDHCQ99643 169 aaPredicted RBP10.62□□□□□ -0.71
CPSF1-201ENST00000526271 RYR1P21817 5038 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 A0A0J9YWU9 116 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 A8MWP6 167 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 J3QRK9 145 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 S1PR2O95136 353 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 CTXN2P0C2S0 81 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 RCVRNP35243 200 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms