RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 SIGLEC8Q9NYZ4 499 aa14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 CCDC59Q9P031 241 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-216ENST00000526055 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-216ENST00000526055 HMX3A6NHT5 357 aa14.12□□□□□ -0.15
TSPAN4-216ENST00000526055 ZNF701M0R085 212 aaPredicted RBP14.12□□□□□ -0.15
TSPAN4-216ENST00000526055 UPK2O00526 184 aa14.12□□□□□ -0.15
TSPAN4-216ENST00000526055 RBMXL2O75526 392 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-216ENST00000526055 HIST1H1BP16401 226 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-216ENST00000526055 PSMB6P28072 239 aa14.12□□□□□ -0.15
TSPAN4-216ENST00000526055 ERVK-16P61578 105 aa14.12□□□□□ -0.15
TSPAN4-216ENST00000526055 EXOSC2Q13868 293 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-216ENST00000526055 VAX1Q5SQQ9 334 aa14.12□□□□□ -0.15
TSPAN4-216ENST00000526055 DGCR14Q96DF8 476 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-216ENST00000526055 FXYD6Q9H0Q3 95 aa14.12□□□□□ -0.15
TSPAN4-216ENST00000526055 RSL24D1Q9UHA3 163 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-216ENST00000526055 A0A1B0GW64 132 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 E7EUB6 86 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 S1PR2O95136 353 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 IGLV1-51P01701 117 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 PRH1P02810 166 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 RLN1P04808 185 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 SPNP16150 400 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 CTRB1P17538 263 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 UCP3P55916 312 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 DEFA5Q01523 94 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 CTRB2Q6GPI1 263 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 DMBX1Q8NFW5 382 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 DYNC2LI1Q8TCX1 351 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 COMMD5Q9GZQ3 224 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 TMEM140Q9NV12 185 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 NDUFA13Q9P0J0 144 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 SMAD5-AS1Q9Y6J3 95 aa14.11□□□□□ -0.15
TSPAN4-216ENST00000526055 MARCH11A6NNE9 402 aa14.1□□□□□ -0.15
TSPAN4-216ENST00000526055 TRBV12-3P01733 135 aa14.1□□□□□ -0.15
TSPAN4-216ENST00000526055 GP9P14770 177 aa14.1□□□□□ -0.15
TSPAN4-216ENST00000526055 TBPP20226 339 aa14.1□□□□□ -0.15
TSPAN4-216ENST00000526055 SYNJ2BPP57105 145 aa14.1□□□□□ -0.15
TSPAN4-216ENST00000526055 OR2B8PP59922 312 aa14.1□□□□□ -0.15
TSPAN4-216ENST00000526055 C15orf32Q32M92 178 aa14.1□□□□□ -0.15
TSPAN4-216ENST00000526055 HSD17B13Q7Z5P4 300 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-216ENST00000526055 SLC38A6Q8IZM9 456 aa14.1□□□□□ -0.15
TSPAN4-216ENST00000526055 RBM38Q9H0Z9 239 aaKnown RBP14.1□□□□□ -0.15
TSPAN4-216ENST00000526055 PEMTQ9UBM1 199 aa14.1□□□□□ -0.15
TSPAN4-216ENST00000526055 EXTL2Q9UBQ6 330 aa14.1□□□□□ -0.15
TSPAN4-216ENST00000526055 OR2J3O76001 311 aa14.09□□□□□ -0.15
TSPAN4-216ENST00000526055 AREGP15514 252 aa14.09□□□□□ -0.15
TSPAN4-216ENST00000526055 FANCD2OSQ96PS1 177 aa14.09□□□□□ -0.15
TSPAN4-216ENST00000526055 RSRP1Q9BUV0 290 aa14.09□□□□□ -0.15
TSPAN4-216ENST00000526055 QTRT1Q9BXR0 403 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-216ENST00000526055 FBXL7Q9UJT9 491 aa14.09□□□□□ -0.15
TSPAN4-216ENST00000526055 CGB1A6NKQ9 187 aa14.08□□□□□ -0.16
TSPAN4-216ENST00000526055 H0Y980 276 aa14.08□□□□□ -0.16
TSPAN4-216ENST00000526055 BMPR1BO00238 502 aa14.08□□□□□ -0.16
TSPAN4-216ENST00000526055 LPAR6P43657 344 aa14.08□□□□□ -0.16
TSPAN4-216ENST00000526055 MRPS10P82664 201 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-216ENST00000526055 IL34Q6ZMJ4 242 aa14.08□□□□□ -0.16
TSPAN4-216ENST00000526055 ARRDC1Q8N5I2 433 aa14.08□□□□□ -0.16
TSPAN4-216ENST00000526055 FCAMRQ8WWV6 532 aa14.08□□□□□ -0.16
TSPAN4-216ENST00000526055 MTFP1Q9UDX5 166 aa14.08□□□□□ -0.16
TSPAN4-216ENST00000526055 IGLC7A0M8Q6 106 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 RGS5O15539 181 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 CYB5BO43169 146 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 IFNA6P05013 189 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 DEFA4P12838 97 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 PTBP1P26599 531 aaKnown RBP eCLIP14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 ZNF585BQ52M93 769 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 RNASE10Q5GAN6 216 aaKnown RBP14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 OR1L8Q8NGR8 309 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 EEF1AKMT3Q96AZ1 226 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 ZNF486Q96H40 463 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 CXorf58Q96LI9 332 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 TSC22D3Q99576 134 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 FKBP11Q9NYL4 201 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 THYN1Q9P016 225 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 RABL2AQ9UBK7 228 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 KLK11Q9UBX7 282 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 RABL2BQ9UNT1 228 aa14.07□□□□□ -0.16
TSPAN4-216ENST00000526055 IGLV11-55A0A075B6I3 123 aa14.06□□□□□ -0.16
TSPAN4-216ENST00000526055 TRBV7-1A0A0A6YYK4 115 aa14.06□□□□□ -0.16
TSPAN4-216ENST00000526055 TRAV3A0A0B4J244 114 aa14.06□□□□□ -0.16
TSPAN4-216ENST00000526055 GGCTO75223 188 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-216ENST00000526055 SNAPC5O75971 98 aa14.06□□□□□ -0.16
TSPAN4-216ENST00000526055 CSN3P07498 182 aa14.06□□□□□ -0.16
TSPAN4-216ENST00000526055 SSBP1Q04837 148 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-216ENST00000526055 PHLDA2Q53GA4 152 aa14.06□□□□□ -0.16
TSPAN4-216ENST00000526055 OR2K2Q8NGT1 345 aa14.06□□□□□ -0.16
TSPAN4-216ENST00000526055 OR52I2Q8NH67 350 aa14.06□□□□□ -0.16
TSPAN4-216ENST00000526055 PRNDQ9UKY0 176 aa14.06□□□□□ -0.16
TSPAN4-216ENST00000526055 GABARAPH6UMI1 98 aa14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 NDUFB8O95169 186 aa14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 KRASP01116 189 aa14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 TRAPPC2P0DI81 140 aa14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 TRAPPC2BP0DI82 140 aa14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 MYOD1P15172 320 aa14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 RND3P61587 244 aa14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 C11orf87Q6NUJ2 197 aa14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 TBC1D26Q86UD7 250 aa14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 LHFPL1Q86WI0 220 aa14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 Q8N402 240 aa14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 OR5B3Q8NH48 314 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms