RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 IGLV2-14P01704 120 aa9.41□□□□□ -0.9
CLNS1A-204ENST00000525428 CX3CL1P78423 397 aa9.41□□□□□ -0.9
CLNS1A-204ENST00000525428 DCAF12Q5T6F0 453 aa9.41□□□□□ -0.9
CLNS1A-204ENST00000525428 C17orf82Q86X59 251 aaPredicted RBP9.41□□□□□ -0.9
CLNS1A-204ENST00000525428 ZNF808Q8N4W9 903 aaPredicted RBP9.41□□□□□ -0.9
CLNS1A-204ENST00000525428 NHLRC2Q8NBF2 726 aa9.41□□□□□ -0.9
CLNS1A-204ENST00000525428 GTSF1LQ9H1H1 148 aa9.41□□□□□ -0.9
CLNS1A-204ENST00000525428 SAA2-SAA4A0A096LPE2 208 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 USF1P22415 310 aaPredicted RBP9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 LGALS7P47929 136 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 SMAGPQ0VAQ4 97 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 MIC13Q5XKP0 118 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 WDR73Q6P4I2 378 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 VWA1Q6PCB0 445 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 ZNF441Q8N8Z8 693 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 SSBP4Q9BWG4 385 aaPredicted RBP9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 LY6G6EA0A0G2JKS1 128 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 A0A1W2PQM1 296 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 C7orf71A4D174 169 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 FAM231BA6NCW3 169 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 FOXH1O75593 365 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 APOA2P02652 100 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 LINC00869P0C866 280 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 ZNF32P17041 273 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 CCL7P80098 99 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 RHBDD2Q6NTF9 364 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 SLC25A34Q6PIV7 304 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 C5orf17Q8NAS9 161 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 DCHS1Q96JQ0 3298 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 TECRQ9NZ01 308 aaKnown RBP9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 U3KQA8 63 aa9.4□□□□□ -0.9
CLNS1A-204ENST00000525428 TRBV9A0A0B4J1U6 114 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 IGLC1P0CG04 106 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 FBLP22087 321 aaKnown RBP9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 ARL4DP49703 201 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 GNG4P50150 75 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 LINC00205P59089 165 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 RPS20P60866 119 aaKnown RBP9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 FOXE3Q13461 319 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 TRIP6Q15654 476 aaKnown RBP9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 PDLIM3Q53GG5 364 aaPredicted RBP9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 CENPWQ5EE01 88 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 SPATA31B1PQ5VZV4 182 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 FAM53AQ6NSI3 398 aaPredicted RBP9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 LINC00173Q6ZV60 143 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 G3V4G9 280 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 MT-ND6P03923 174 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 TCTAP57738 103 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 RHOBP62745 196 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 TRAV9-1A0A075B6T8 112 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 PMS2P5A8MQ11 134 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 TNFSF11O14788 317 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 CCL2P13500 99 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 CRYGSP22914 178 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 CA6P23280 308 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 CRYBB3P26998 211 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 CD1BP29016 333 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 C12orf54Q6X4T0 127 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 NINJ1Q92982 152 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 GCM1Q9NP62 436 aa9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 LIN7CQ9NUP9 197 aaKnown RBP9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 PEF1Q9UBV8 284 aaKnown RBP9.39□□□□□ -0.91
CLNS1A-204ENST00000525428 IGHV3-64DA0A0J9YX35 117 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 LILRA5A6NI73 299 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 C2orf70A6NJV1 201 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 SYNGR1O43759 233 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 HAND1O96004 215 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 AMY1AP04745 511 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 CAMPP49913 170 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 TMEM42Q69YG0 159 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 WDR74Q6RFH5 385 aaPredicted RBP9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 FOXL2NBQ6ZUU3 175 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 OR8B3Q8NGG8 313 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 OR4S2Q8NH73 311 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 FGFBP3Q8TAT2 258 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 AP1S3Q96PC3 154 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 STRADBQ9C0K7 418 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 ZNF331Q9NQX6 463 aaPredicted RBP9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 hCG_38984A0A1B0GV85 526 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 TRAPPC2LH3BP13 241 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 SYNGR3O43761 229 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 ACTL6BO94805 426 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 CD24P25063 80 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 RBPJQ06330 500 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 DRAM1Q8N682 238 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 SCCPDHQ8NBX0 429 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 CT55Q8WUE5 264 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 TMEM70Q9BUB7 260 aa9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 SF3B5Q9BWJ5 86 aaKnown RBP9.38□□□□□ -0.91
CLNS1A-204ENST00000525428 LRRC30A6NM36 301 aa9.37□□□□□ -0.91
CLNS1A-204ENST00000525428 DUX1O43812 170 aa9.37□□□□□ -0.91
CLNS1A-204ENST00000525428 HLA-DQA1P01909 254 aa9.37□□□□□ -0.91
CLNS1A-204ENST00000525428 RPL24P83731 157 aaKnown RBP9.37□□□□□ -0.91
CLNS1A-204ENST00000525428 TBR1Q16650 682 aa9.37□□□□□ -0.91
CLNS1A-204ENST00000525428 Q6ZSR3 168 aa9.37□□□□□ -0.91
CLNS1A-204ENST00000525428 SPACA3Q8IXA5 215 aa9.37□□□□□ -0.91
CLNS1A-204ENST00000525428 Q8N7P7 452 aa9.37□□□□□ -0.91
CLNS1A-204ENST00000525428 OR1L3Q8NH93 324 aa9.37□□□□□ -0.91
CLNS1A-204ENST00000525428 HELTA6NFD8 242 aa9.37□□□□□ -0.91
CLNS1A-204ENST00000525428 CXorf1O96002 111 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms