RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 MARCH11A6NNE9 402 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 CENPXA8MT69 81 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 INMT-MINDY4F8WBC2 141 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 TRIM77I1YAP6 450 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 FGF16O43320 207 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 KBTBD11O94819 623 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 OR2A4O95047 310 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 NDUFA7O95182 113 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 IFNA2P01563 188 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 IGHG2P01859 326 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 HLA-DRB1P01911 266 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 PRH1P02810 166 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 HOXB5P09067 269 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 RRASP10301 218 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 AREGP15514 252 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 NQO2P16083 231 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 KIR2DS2P43631 304 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 LGALS7P47929 136 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 TAS2R31P59538 309 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 CFHR3Q02985 330 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 DCTN2Q13561 401 aaKnown RBP5.08□□□□□ -1.6
CD44-214ENST00000525211 FXYD3Q14802 87 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 TRIM16LQ309B1 348 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 TMEM128Q5BJH2 165 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 NMSQ5H8A3 153 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 GGNBP1Q5YKI7 109 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 MZT2BQ6NZ67 158 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 C16orf82Q7Z2V1 217 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 PPP1R27Q86WC6 154 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 SGPP2Q8IWX5 399 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 CCDC71LQ8N9Z2 235 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 TEX45Q8NA69 505 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 SPATA3Q8NHX4 192 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 GRPEL2Q8TAA5 225 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 ENKURQ8TC29 256 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 TMEM56Q96MV1 263 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 OR2A7Q96R45 310 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 TSNAXQ99598 290 aaKnown RBP5.08□□□□□ -1.6
CD44-214ENST00000525211 RNF5Q99942 180 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 RASL11BQ9BPW5 248 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 MARVELD1Q9BSK0 173 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 KLK15Q9H2R5 256 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 OR51J1Q9H342 316 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 PARP11Q9NR21 331 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 LIN7CQ9NUP9 197 aaKnown RBP5.08□□□□□ -1.6
CD44-214ENST00000525211 BET1LQ9NYM9 111 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 COMMD9Q9P000 198 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 PITPNC1Q9UKF7 332 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 DMRT1Q9Y5R6 373 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 NUBP2Q9Y5Y2 271 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 TMEM56-RWDD3S4R434 201 aa5.08□□□□□ -1.6
CD44-214ENST00000525211 MSGN1A6NI15 193 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 RNF212BA8MTL3 300 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 ST8SIA3O43173 380 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 SPDEFO95238 335 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 SIX6O95475 246 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 HLA-AP01891 365 aaKnown RBP5.07□□□□□ -1.6
CD44-214ENST00000525211 IL5P05113 134 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 REG1AP05451 166 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 SERPINE2P07093 398 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 CD28P10747 220 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 PPIFP30405 207 aaKnown RBP5.07□□□□□ -1.6
CD44-214ENST00000525211 ARHGDIBP52566 201 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 MFAP2P55001 183 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 SCGB2A2Q13296 93 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 KIAA0141Q14154 515 aaPredicted RBP5.07□□□□□ -1.6
CD44-214ENST00000525211 OXA1LQ15070 435 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 PLGLAQ15195 96 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 TNXAQ16473 311 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 VMA21Q3ZAQ7 101 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 C4orf46Q504U0 113 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 AWAT1Q58HT5 328 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 CXorf66Q5JRM2 361 aaPredicted RBP5.07□□□□□ -1.6
CD44-214ENST00000525211 ZNF562Q6V9R5 426 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 SLC35E3Q7Z769 313 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 KLHDC1Q8N7A1 406 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 LFNGQ8NES3 379 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 DMBX1Q8NFW5 382 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 OR8H1Q8NGG4 311 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 ZNF431Q8TF32 576 aaPredicted RBP5.07□□□□□ -1.6
CD44-214ENST00000525211 MITD1Q8WV92 249 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 RBPMSQ93062 196 aaKnown RBP5.07□□□□□ -1.6
CD44-214ENST00000525211 OR10C1Q96KK4 312 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 JMJD8Q96S16 334 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 PRSS22Q9GZN4 317 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 NPFFR1Q9GZQ6 430 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 ALX4Q9H161 411 aaPredicted RBP5.07□□□□□ -1.6
CD44-214ENST00000525211 CACNG5Q9UF02 275 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 ALG5Q9Y673 324 aa5.07□□□□□ -1.6
CD44-214ENST00000525211 CMYA5Q8N3K9 4069 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 COL6A5A8TX70 2615 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 A0A1B0GVG6 124 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 IGLC7A0M8Q6 106 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 CLPSL1A2RUU4 121 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 C15orf61A6NNL5 157 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 PITX3O75364 302 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 DUS4LO95620 317 aaKnown RBP5.06□□□□□ -1.6
CD44-214ENST00000525211 PTTG1O95997 202 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 HRASP01112 189 aa5.06□□□□□ -1.6
CD44-214ENST00000525211 CRYBA1P05813 215 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms