RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CTRB2Q6GPI1 263 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 SPAG16Q8N0X2 631 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 OR5H6Q8NGV6 325 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 OVOL2Q9BRP0 275 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 CENPOQ9BU64 300 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 GGTLC1Q9BX51 225 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 DCSTAMPQ9H295 470 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 RNF167Q9H6Y7 350 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 IGLV11-55A0A075B6I3 123 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 TRAV18A0A075B6X5 111 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 IGHV3-21A0A0B4J1V1 117 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 MEIS3P1A6NDR6 274 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 SLC22A5O76082 557 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 HRASP01112 189 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 CRYGCP07315 174 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 MAS1LP35410 378 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 EWSR1Q01844 656 aaKnown RBP eCLIP11.53□□□□□ -0.56
MRPS28-209ENST00000522987 FAM209BQ5JX69 171 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 BEST4Q8NFU0 473 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 OR10W1Q8NGF6 305 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 OR13F1Q8NGS4 319 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 SLC5A7Q9GZV3 580 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 RHBDL2Q9NX52 303 aa11.53□□□□□ -0.56
MRPS28-209ENST00000522987 IGHV3OR16-8A0A075B7F1 116 aa11.52□□□□□ -0.57
MRPS28-209ENST00000522987 LOC102724200A0A096LPH7 203 aaPredicted RBP11.52□□□□□ -0.57
MRPS28-209ENST00000522987 CXorf65A6NEN9 183 aa11.52□□□□□ -0.57
MRPS28-209ENST00000522987 DHFRP00374 187 aa11.52□□□□□ -0.57
MRPS28-209ENST00000522987 OR2B8PP59922 312 aa11.52□□□□□ -0.57
MRPS28-209ENST00000522987 SFXN4Q6P4A7 337 aa11.52□□□□□ -0.57
MRPS28-209ENST00000522987 ZNF773Q6PK81 442 aa11.52□□□□□ -0.57
MRPS28-209ENST00000522987 ZNF66Q6ZN08 573 aa11.52□□□□□ -0.57
MRPS28-209ENST00000522987 TMEM17Q86X19 198 aa11.52□□□□□ -0.57
MRPS28-209ENST00000522987 OR51H1Q8NH63 302 aa11.52□□□□□ -0.57
MRPS28-209ENST00000522987 A0A0J9YWU9 116 aa11.51□□□□□ -0.57
MRPS28-209ENST00000522987 A8MWP6 167 aa11.51□□□□□ -0.57
MRPS28-209ENST00000522987 LY6G6CO95867 125 aa11.51□□□□□ -0.57
MRPS28-209ENST00000522987 PPYP01298 95 aa11.51□□□□□ -0.57
MRPS28-209ENST00000522987 HIST1H1BP16401 226 aaKnown RBP11.51□□□□□ -0.57
MRPS28-209ENST00000522987 SDC2P34741 201 aa11.51□□□□□ -0.57
MRPS28-209ENST00000522987 IDNKQ5T6J7 187 aa11.51□□□□□ -0.57
MRPS28-209ENST00000522987 RBPMS2Q6ZRY4 209 aaKnown RBP11.51□□□□□ -0.57
MRPS28-209ENST00000522987 SPARTQ8N0X7 666 aa11.51□□□□□ -0.57
MRPS28-209ENST00000522987 SLC25A38Q96DW6 304 aa11.51□□□□□ -0.57
MRPS28-209ENST00000522987 VCX3BQ9H321 246 aa11.51□□□□□ -0.57
MRPS28-209ENST00000522987 SSR3Q9UNL2 185 aa11.51□□□□□ -0.57
MRPS28-209ENST00000522987 IGLC7A0M8Q6 106 aa11.5□□□□□ -0.57
MRPS28-209ENST00000522987 ERICH4A6NGS2 130 aa11.5□□□□□ -0.57
MRPS28-209ENST00000522987 ZNF207O43670 478 aaKnown RBP11.5□□□□□ -0.57
MRPS28-209ENST00000522987 S1PR2O95136 353 aa11.5□□□□□ -0.57
MRPS28-209ENST00000522987 GALP22466 123 aa11.5□□□□□ -0.57
MRPS28-209ENST00000522987 HSPA13P48723 471 aa11.5□□□□□ -0.57
MRPS28-209ENST00000522987 DEFB135Q30KP9 77 aa11.5□□□□□ -0.57
MRPS28-209ENST00000522987 UBE2UQ5VVX9 321 aa11.5□□□□□ -0.57
MRPS28-209ENST00000522987 PLET1Q6UQ28 207 aa11.5□□□□□ -0.57
MRPS28-209ENST00000522987 DMBX1Q8NFW5 382 aa11.5□□□□□ -0.57
MRPS28-209ENST00000522987 OR1L6Q8NGR2 347 aa11.5□□□□□ -0.57
MRPS28-209ENST00000522987 ZNF502Q8TBZ5 544 aa11.5□□□□□ -0.57
MRPS28-209ENST00000522987 HINT2Q9BX68 163 aa11.5□□□□□ -0.57
MRPS28-209ENST00000522987 BET1LQ9NYM9 111 aa11.5□□□□□ -0.57
MRPS28-209ENST00000522987 TRBV7-1A0A0A6YYK4 115 aa11.49□□□□□ -0.57
MRPS28-209ENST00000522987 LOC100506127A0A0U1RQW1 187 aa11.49□□□□□ -0.57
MRPS28-209ENST00000522987 OR2T8A6NH00 312 aa11.49□□□□□ -0.57
MRPS28-209ENST00000522987 UPK2O00526 184 aa11.49□□□□□ -0.57
MRPS28-209ENST00000522987 RPL35AP18077 110 aaKnown RBP11.49□□□□□ -0.57
MRPS28-209ENST00000522987 FGF9P31371 208 aaPredicted RBP11.49□□□□□ -0.57
MRPS28-209ENST00000522987 GABARAPL2P60520 117 aa11.49□□□□□ -0.57
MRPS28-209ENST00000522987 SLC25A24Q6NUK1 477 aa11.49□□□□□ -0.57
MRPS28-209ENST00000522987 ZNF818PQ6ZRF7 136 aa11.49□□□□□ -0.57
MRPS28-209ENST00000522987 LINC00476Q8WZB0 136 aa11.49□□□□□ -0.57
MRPS28-209ENST00000522987 CXorf58Q96LI9 332 aa11.49□□□□□ -0.57
MRPS28-209ENST00000522987 COMMD5Q9GZQ3 224 aa11.49□□□□□ -0.57
MRPS28-209ENST00000522987 TMEM140Q9NV12 185 aa11.49□□□□□ -0.57
MRPS28-209ENST00000522987 SCGNO76038 276 aa11.48□□□□□ -0.57
MRPS28-209ENST00000522987 OR13C7P0DN81 318 aa11.48□□□□□ -0.57
MRPS28-209ENST00000522987 ANKRD55Q3KP44 614 aa11.48□□□□□ -0.57
MRPS28-209ENST00000522987 AADACL3Q5VUY0 350 aa11.48□□□□□ -0.57
MRPS28-209ENST00000522987 TPRA1Q86W33 373 aa11.48□□□□□ -0.57
MRPS28-209ENST00000522987 HOGA1Q86XE5 327 aa11.48□□□□□ -0.57
MRPS28-209ENST00000522987 OR4A5Q8NH83 315 aa11.48□□□□□ -0.57
MRPS28-209ENST00000522987 C20orf24Q9BUV8 137 aa11.48□□□□□ -0.57
MRPS28-209ENST00000522987 NSG2Q9Y328 171 aa11.48□□□□□ -0.57
MRPS28-209ENST00000522987 HPRT1P00492 218 aa11.47□□□□□ -0.57
MRPS28-209ENST00000522987 NQO2P16083 231 aa11.47□□□□□ -0.57
MRPS28-209ENST00000522987 TAS2R31P59538 309 aa11.47□□□□□ -0.57
MRPS28-209ENST00000522987 CATR1Q13166 79 aa11.47□□□□□ -0.57
MRPS28-209ENST00000522987 LYG2Q86SG7 212 aa11.47□□□□□ -0.57
MRPS28-209ENST00000522987 OR2C3Q8N628 320 aa11.47□□□□□ -0.57
MRPS28-209ENST00000522987 UBAC2Q8NBM4 344 aa11.47□□□□□ -0.57
MRPS28-209ENST00000522987 QTRT1Q9BXR0 403 aaKnown RBP11.47□□□□□ -0.57
MRPS28-209ENST00000522987 MRPL27Q9P0M9 148 aaKnown RBP11.47□□□□□ -0.57
MRPS28-209ENST00000522987 RAB26Q9ULW5 256 aa11.47□□□□□ -0.57
MRPS28-209ENST00000522987 UFC1Q9Y3C8 167 aa11.47□□□□□ -0.57
MRPS28-209ENST00000522987 IGHV3-49A0A0A0MS15 119 aa11.46□□□□□ -0.57
MRPS28-209ENST00000522987 TEX50A0A1B0GTY4 177 aa11.46□□□□□ -0.57
MRPS28-209ENST00000522987 TGOLN2O43493 480 aa11.46□□□□□ -0.57
MRPS28-209ENST00000522987 RLN1P04808 185 aa11.46□□□□□ -0.57
MRPS28-209ENST00000522987 C8orf88P0DMB2 117 aa11.46□□□□□ -0.57
MRPS28-209ENST00000522987 MFAP2P55001 183 aa11.46□□□□□ -0.57
MRPS28-209ENST00000522987 HERV-K104P61576 105 aa11.46□□□□□ -0.57
MRPS28-209ENST00000522987 WT1-ASQ06250 92 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms