RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	ICAM4	Q14773	271 aa		13.52	□□□□□ -0.24
FAM49B-223	ENST00000522746	ZNF787	Q6DD87	383 aa		13.52	□□□□□ -0.24
FAM49B-223	ENST00000522746	OSR1	Q8TAX0	266 aa	Predicted RBP	13.52	□□□□□ -0.24
FAM49B-223	ENST00000522746	MBD3L1	Q8WWY6	194 aa		13.52	□□□□□ -0.24
FAM49B-223	ENST00000522746	EPG5	Q9HCE0	2579 aa		13.52	□□□□□ -0.25
FAM49B-223	ENST00000522746	SMCO3	A2RU48	225 aa		13.52	□□□□□ -0.25
FAM49B-223	ENST00000522746	KBTBD11	O94819	623 aa		13.52	□□□□□ -0.25
FAM49B-223	ENST00000522746	FAM71F2	Q6NXP2	309 aa		13.52	□□□□□ -0.25
FAM49B-223	ENST00000522746	BET1L	Q9NYM9	111 aa		13.52	□□□□□ -0.25
FAM49B-223	ENST00000522746	WDR83OS	Q9Y284	106 aa		13.52	□□□□□ -0.25
FAM49B-223	ENST00000522746	TNC	P24821	2201 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	PPIAL4C	A0A0B4J2A2	164 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	SCAF4	O95104	1147 aa	Known RBP	13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	IFNA4	P05014	189 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	FBP1	P09467	338 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	RNF224	P0DH78	156 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	PPIAL4G	P0DN37	164 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	ZNF137P	P52743	207 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	TMEM177	Q53S58	311 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	FFAR4	Q5NUL3	377 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	WDR25	Q64LD2	544 aa	Predicted RBP	13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746		Q8N7P7	452 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	SLC24A4	Q8NFF2	622 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	OR8B3	Q8NGG8	313 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	RXFP4	Q8TDU9	374 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	LHX4	Q969G2	390 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	FLYWCH2	Q96CP2	140 aa	Known RBP	13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	OR8B2	Q96RD0	313 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	ENY2	Q9NPA8	101 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	GNG13	Q9P2W3	67 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	IGHV2-26	A0A0B4J1V2	119 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	TEX50	A0A1B0GTY4	177 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	NPY1R	P25929	384 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	AKIRIN2	Q53H80	203 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	ZNF506	Q5JVG8	444 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	TGIF2LX	Q8IUE1	241 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	NEIL1	Q96FI4	390 aa	Predicted RBP	13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	ZNF257	Q9Y2Q1	563 aa		13.51	□□□□□ -0.25
FAM49B-223	ENST00000522746	MAP1LC3B2	A6NCE7	125 aa		13.5	□□□□□ -0.25
FAM49B-223	ENST00000522746	CA2	P00918	260 aa		13.5	□□□□□ -0.25
FAM49B-223	ENST00000522746	RAB11A	P62491	216 aa		13.5	□□□□□ -0.25
FAM49B-223	ENST00000522746	PRCD	Q00LT1	54 aa		13.5	□□□□□ -0.25
FAM49B-223	ENST00000522746	TREML4	Q6UXN2	200 aa		13.5	□□□□□ -0.25
FAM49B-223	ENST00000522746	DTX2	Q86UW9	622 aa		13.5	□□□□□ -0.25
FAM49B-223	ENST00000522746	PDPN	Q86YL7	162 aa		13.5	□□□□□ -0.25
FAM49B-223	ENST00000522746	ZNF709	Q8N972	641 aa		13.5	□□□□□ -0.25
FAM49B-223	ENST00000522746	MAP1LC3B	Q9GZQ8	125 aa		13.5	□□□□□ -0.25
FAM49B-223	ENST00000522746	SMDT1	Q9H4I9	107 aa		13.5	□□□□□ -0.25
FAM49B-223	ENST00000522746	SLC25A22	Q9H936	323 aa		13.5	□□□□□ -0.25
FAM49B-223	ENST00000522746	MIOX	Q9UGB7	285 aa		13.5	□□□□□ -0.25
FAM49B-223	ENST00000522746	ZFP92	A6NM28	416 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	HMGB3	O15347	200 aa	Known RBP	13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	SRP19	P09132	144 aa	Known RBP	13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	OR10G4	Q8NGN3	311 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	OR10G9	Q8NGN4	311 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	OR10G7	Q8NGN6	311 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	NEU4	Q8WWR8	484 aa	Predicted RBP	13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	RAB1C	Q92928	201 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	PLEKHA3	Q9HB20	300 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	USP9X	Q93008	2570 aa	Predicted RBP	13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	LOC102723971	A0A1B0GUV8	181 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	DEFA4	P12838	97 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	DLK1	P80370	383 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	OR4C13	Q8NGP0	309 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	TIMD4	Q96H15	378 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	C20orf24	Q9BUV8	137 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	SLC39A9	Q9NUM3	307 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	WASHC3	Q9Y3C0	194 aa		13.49	□□□□□ -0.25
FAM49B-223	ENST00000522746	UTP20	O75691	2785 aa	Known RBP	13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	IGHV3-72	A0A0B4J1Y9	119 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	C22orf46	C9J442	243 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	C17orf112	F2Z3M2	114 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	IGLV1-47	P01700	117 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	CDKN1A	P38936	164 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	AKR1C3	P42330	323 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	CEBPG	P53567	150 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	C8orf46	Q8TAG6	207 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	RITA1	Q96K30	269 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	GGACT	Q9BVM4	153 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	UBTD1	Q9HAC8	227 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	AKAP6	Q13023	2319 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	ZNF462	Q96JM2	2506 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	NDUFS7	O75251	213 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	IGLV2-23	P01705	113 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	COX7A1	P24310	79 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	IL3RA	P26951	378 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	HLA-DRB5	Q30154	266 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	AWAT1	Q58HT5	328 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	SOHLH1	Q5JUK2	328 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	FAM122C	Q6P4D5	195 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	CYB561D1	Q8N8Q1	229 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	OR10W1	Q8NGF6	305 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	C1orf159	Q96HA4	380 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	PCGF1	Q9BSM1	259 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	FKBP11	Q9NYL4	201 aa		13.48	□□□□□ -0.25
FAM49B-223	ENST00000522746	TACC2	O95359	2948 aa		13.47	□□□□□ -0.25
FAM49B-223	ENST00000522746		A0A1W2PPH5	198 aa		13.47	□□□□□ -0.25
FAM49B-223	ENST00000522746	MB	P02144	154 aa		13.47	□□□□□ -0.25
FAM49B-223	ENST00000522746	HSPB1	P04792	205 aa	Known RBP	13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms